MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-349H21
Chromosome	3 (Build37)
Map Location	158,792,570 - 158,793,700
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Lrrc7, LOC100041008, LOC668905
Downstream gene	LOC668907, Depdc1a, Rpe65, Gpr177
Link	Open Mouse BAC browser

Click to get alignment info.

name	Ankrd13c (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:433667 MGI:2139746
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sfrs11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69207 MGI:1916457
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lrrc40 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67144 MGI:1914394
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lrrc7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:242274 MGI:2676665
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041008 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041008
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC668905 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668905
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	LOC668907 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668907
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Depdc1a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76131 MGI:1923381
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rpe65 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19892 MGI:98001
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gpr177 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68151 MGI:1915401
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ankrd13c (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:67972430 GeneID:433667 MGI:2139746
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ankyrin repeat domain 13c transcript_id : NM_001013806.1

name	Sfrs11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142378730 GeneID:69207 MGI:1916457
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : splicing factor, arginine/serine-rich 11 transcript_id : NM_026989.2

name	Lrrc40 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142361498 GeneID:67144 MGI:1914394
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : leucine rich repeat containing 40 transcript_id : NM_024194.3

name	Lrrc7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486884 GeneID:242274 MGI:2676665
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : leucine rich repeat containing 7 transcript_id : NM_001081358.1

name	Depdc1a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31542024 GeneID:76131 MGI:1923381
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DEP domain containing 1a transcript_id : NM_029523.2

name	Rpe65 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:19920337 GeneID:19892 MGI:98001
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : retinal pigment epithelium 65 transcript_id : NM_029987.1

name	Gpr177 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:98986315 GeneID:68151 MGI:1915401
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : G protein-coupled receptor 177 transcript_id : NM_026582.3

name	Ankrd13c (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:67972431 CCDS:CCDS17933.1 GeneID:433667 MGI:2139746
definition	codon_start : 1 product : ankyrin repeat domain 13c protein_id : NP_001013828.1

name	Sfrs11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33469007 CCDS:CCDS17934.1 GeneID:69207 MGI:1916457
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] codon_start : 1 product : splicing factor, arginine/serine-rich 11 protein_id : NP_081265.1

name	Lrrc40 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31541911 CCDS:CCDS17935.1 GeneID:67144 MGI:1914394
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : leucine rich repeat containing 40 protein_id : NP_077156.2

name	Lrrc7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486885 GeneID:242274 MGI:2676665
definition	GO_function : GO:0005515 - protein binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 note : densin 180 product : leucine rich repeat containing 7 protein_id : NP_001074827.1

name	Depdc1a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542025 CCDS:CCDS17936.1 GeneID:76131 MGI:1923381
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] codon_start : 1 product : DEP domain containing 1a protein_id : NP_083799.2

name	Rpe65 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19920338 GeneID:19892 MGI:98001
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_process : GO:0007468 - regulation of rhodopsin gene activity [Evidence IMP]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0042574 - retinal metabolism [Evidence IMP]; GO:0007601 - visual perception [Evidence IMP] codon_start : 1 exception : mismatches in translation note : retinal pigment epithelium, 65 kDa; modifier of retinal degeneration 1 product : retinal pigment epithelium 65 protein_id : NP_084263.1

name	Gpr177 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:98986316 GeneID:68151 MGI:1915401
definition	GO_function : GO:0004872 - receptor activity [Evidence IEA] codon_start : 1 product : G protein-coupled receptor 177 protein_id : NP_080858.3

name	LOC100041008 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041008
definition	number : 1 pseudo : _no_value

name	LOC100041008 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041008
definition	number : 2 pseudo : _no_value

name	LOC668905 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668905
definition	number : 1 pseudo : _no_value

name	LOC668907 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668907
definition	number : 3 pseudo : _no_value

name	LOC668907 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668907
definition	number : 2 pseudo : _no_value

name	LOC668907 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668907
definition	number : 1 pseudo : _no_value

clone name	MSMg01-401E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-055N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-274I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-050L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-074K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-112L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079C16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-076M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348F18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-164M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305A19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-504N10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-375D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-547F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-099C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-320B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-190E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-061A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-343F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-184O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472K05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-302P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-320L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-168K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174P09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287A19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-051O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085D12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240J11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251D04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085C07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-158K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245K15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308G05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060O17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302G06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-323C21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-311J03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241I11
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-349H21.b	B6Ng01-349H21.g
ACC	GA130468	GA130469
length	1,127	1,210
definition	B6Ng01-349H21.b	B6Ng01-349H21.g
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattctatgtgaagagagaggtggtaaggcaggaatagaaaagaggtga gactggatgttggacttgtcagtgggtctcacatattaactagagactga tctatcatgaaccaatattcagattttcaagctaaatcttcccacacagc agaggcaatctatgacacttcagtgtagctttggtttaatctatcatcca gttattgtgtctgactaacagaattctgggaaaaactccagtgcaaactc taccctccaaaatagttctgttatcaaatacattttagctgaagaccaac cctagtgaaaacaacccatcaattactactagtatcttccaatatttaga tttaaattcattatatgaaatggtatataaaaaccagatctaaagtagta agataataccattctcatttattttaaggtccacctttttaaaagacaac ttcttaggtcatatagtatatttttagtttcataactatatatcagaact caaactcagatggatatttctaatttgtaaatttgtccatttctattacc tattgagaaagaaaatgcagcctgtgatgaatacggcacaactatctgtg gtctgacaaaccttgaccttcttgtctacttcttgcccaccccttgccct taactaatagaaccttaactgttgtttgtttgtttgttttggtagagttc tctgtatctcatattggtcacatcattgtgtgttccatttcagtcattaa atcatggaaacttttttctccatggcaactgatttttcttcacatggaga tatttattgccaatgatatagaaaagggaactttgctaataaagaatgct gtttatgaataagaagccaagctctgaagagaattttaagtcttgctttt attctttacttttttgaattgaagtctgattctgttgaagtcattttgtg atcatagtgacaagctagatgatagattaatatactattattactagtgg aataaagagggcattagaactttttgtactactactaaactactgatgct gatttaagcaaccattatggtcatagagtatttggttttcaggaagtaag gatcctcatttgtgtggtctggtatat	gaattctcacctgaggaataccgaatggctgagaagcacctgaaaaactg ttcagcatccttaatcatcagggaaaagcaaatcaaaacaatcctgagat tccatctcacaccattcataatggctaagataaaaaattcaggtgacagc agatgctggtgaagatgtggagaaagagaaacactcctccactctcggtg ggattgcaagcttgtacaaccactctggaaatcagtctggcggtttctca gaaaattgcacgtggtactaccggaggatcccacaatacctctcctgggc atatatccagaagatgttccaactagttagaaaagaacacactccactat gttcatagcagccttatttataatagccagaagctggaaagaaaccagat gcccctcaacagaggaatggatacaaaaaatgtggtacatttaccaaatg gagtactgctcagctattaaaaagaatgaatttatgaaattcctgggcaa atggttggacctggagggcattttgctgagttaggtaacccaatcacaaa agaactcgcacaatatgtactcactgataagtggacattagcccagaaac ttagaatacccaagatataagttacaacttgcaaaacacatggatctcaa aaagaacgaaggccaaattatgtacactttgccccttcttagaattggga acaaaatacccatggaaggagttacagagacaaagtttggagctgagaca aaaggatggaccatctagagactgccatatcaagggatccatcccataat cagcctccaaacgctgacaccattgcatacactagcaagattgtgctgat aggaccctgatataactgtctcttgtgagactatgccgggggcctaaaaa acacataagtggatgctcacagtcagctattggatggaccacagggtctc tcaatggaggagctagagaaattcctctaaggagcttaaagggatctgca accctataggtggaactaacattatggaacttaaccagttacctcggagc tccttgacttcttagcttgcaatatgtatcaaaaaattggccctagttca ggccatcactggcaagagaagcccaattgggacttgccattctttatatt gccccagtaccagcgcgtattgccaagggcaccaaaaaaagtgtggtaga gtgtgtggtg
quality values	Open. Hide. 62 47 43 41 62 62 62 56 54 62 62 62 54 49 62 62 62 62 62 62 62 59 25 62 59 59 62 62 62 59 43 38 28 43 29 46 59 59 50 59 62 62 62 62 62 62 54 54 62 62 62 59 49 62 62 62 59 54 62 62 62 62 62 59 59 62 62 62 62 59 59 62 62 62 62 59 59 56 38 54 48 54 54 62 62 62 59 62 62 62 59 59 62 62 62 59 59 62 62 59 62 62 42 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 54 62 62 62 62 62 62 62 62 62 59 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 59 56 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 54 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 52 62 62 62 62 62 54 52 58 58 58 58 49 54 58 58 58 49 58 58 58 58 58 58 58 58 54 58 58 58 58 58 58 58 54 58 43 52 58 58 58 58 58 58 58 58 54 58 58 58 58 58 58 58 58 54 58 58 58 52 58 58 58 54 46 58 54 54 51 58 58 58 58 46 58 45 42 58 58 58 52 49 54 50 58 52 51 51 49 58 58 58 51 58 51 58 58 53 58 58 50 51 54 58 58 49 19 58 51 49 58 54 58 58 44 39 58 54 58 48 48 51 58 48 49 51 50 49 49 54 58 49 50 58 51 58 58 50 49 58 58 58 50 49 58 49 58 44 50 49 53 52 41 33 46 54 40 54 39 58 46 30 58 40 41 50 54 50 54 51 34 49 54 40 54 51 54 32 49 50 53 32 54 44 51 34 54 54 51 54 37 39 45 39 54 33 39 51 42 54 52 52 54 28 32 37 49 51 45 45 45 53 52 41 25 32 45 52 40 45 34 53 45 37 51 51 54 41 54 32 54 37 29 32 28 27 54 54 39 42 34 42 52 40 28 42 47 19 51 46 39 40 40 45 53 46 38 49 27 32 47 49 52 49 49 38 39 35 38 33 26 29 40 46 34 32 32 45 32 36 37 27 47 47 51 31 42 45 42 31 20 29 25 31 30 33 26 26 36 38 36 33 51 31 31 31 28 38 24 20 13 32 24 35 30 31 31 41 36 26 46 48 46 34 29 46 33 27 25 32 31 47 21 30 31 29 12 46 31 33 41 31 15 43 42 29 42 30 43 42 23 47 26 31 31 14 26 35 31 27 30 21 41 41 32 31 16 12 25 30 30 37 31 30 23 25 27 15 32 15 35 20 15 48 46 24 7 31 41 31 31 25 24 28 26 35 48 44 25 11 13 32 34 31 48 29 29 31 31 48 48 48 48 30 14 21 25 32 6 8 17 30 27 16 13 13 23 31 27 24 31 25 35 11 21 30 23 17 14 12 15 19 26 47 40 22 31 10 32 32 32 21 10 13 39 18 12 18 34 12 22 31 14 20 34 31 31 34 32 27 28 19 21 11 19 8 5 29 8 21 34 27 14 20 31 17 6 10 14 16 25 28 26 24 27 14 5 21 21 16 6 11 27 38 20 9 14 10 34 25 10 10 19 18 11 8 18 28 21 12 29 40 34 15 28 20 17 28 22 18 5 9 16 19 16 27 30 18 19 11 8 20 15 13 3 5 19 10 11 5 11 18 30 20 21 12 5 4 3 4 10 10 11 18 8 17 13 14 12 1 5 8 16 6 7 5 7 21 11 7 26 18 7 4 9 28 25 20 6 9 3 6 22 24 8 23 7 7 15 10 22 7 5 8 7 20 10 5 28 14 9 4 5 4 6 3 2 2 6 7 7 8 18 10 7 5	Open. Hide. 62 47 51 39 62 62 62 47 51 56 56 56 38 28 28 38 37 28 51 59 59 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 54 54 54 54 62 62 62 62 62 62 62 59 62 54 54 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 54 54 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 38 56 38 26 31 38 62 56 62 62 62 62 62 46 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 43 56 56 56 62 62 49 62 62 62 62 62 62 62 50 56 56 41 38 43 27 23 30 34 35 62 62 62 62 62 42 43 41 46 34 50 62 62 52 62 54 62 62 62 62 62 62 62 62 62 62 62 45 58 58 54 58 58 58 52 58 58 58 58 58 48 54 52 52 52 52 41 47 48 54 54 58 46 47 29 21 25 32 35 46 46 52 52 54 58 58 48 58 58 34 40 44 33 33 42 31 34 50 52 58 29 37 27 33 35 58 46 54 54 45 47 42 40 42 50 52 52 53 52 50 50 40 34 43 41 51 53 51 37 33 37 46 33 42 39 51 51 58 58 49 58 50 46 41 41 39 48 46 48 58 48 52 58 58 35 43 32 32 37 37 41 19 33 42 28 33 23 51 42 42 52 52 42 48 46 50 43 40 35 50 43 40 38 49 25 51 34 50 38 33 28 22 40 33 50 37 26 24 31 37 26 42 32 39 37 50 50 34 32 40 35 50 50 50 44 31 35 39 39 20 52 54 51 51 37 53 49 30 32 54 29 14 29 19 34 32 25 22 51 50 39 49 51 39 24 39 29 37 38 37 31 35 41 31 38 25 25 30 34 41 33 45 18 24 14 40 53 51 54 39 51 26 52 26 52 52 45 30 29 52 44 38 29 40 54 37 33 31 26 49 35 24 29 32 39 32 27 40 47 32 27 27 6 40 38 33 53 53 31 51 46 52 24 31 40 32 53 24 35 23 41 40 51 32 21 47 21 14 40 34 30 14 27 25 32 30 30 31 21 33 22 21 31 23 31 31 31 25 31 31 32 30 22 32 51 51 31 19 32 31 27 21 39 34 32 31 28 37 15 42 31 30 24 18 21 26 21 25 23 21 41 28 28 19 23 18 17 33 19 24 31 27 27 37 13 11 27 23 31 18 26 27 25 33 32 24 26 8 23 17 27 14 36 41 32 31 34 31 23 36 19 30 33 22 11 6 38 24 30 22 10 16 20 34 14 32 23 25 31 24 32 31 32 27 21 41 17 13 19 14 41 24 33 31 33 26 33 23 18 41 38 29 10 7 17 31 21 36 36 41 36 29 25 18 33 21 32 38 31 19 25 38 33 34 23 24 22 21 13 11 20 16 15 18 19 21 28 26 14 19 34 17 21 14 5 8 31 33 42 31 6 7 21 14 12 24 16 5 12 5 23 10 10 18 8 21 19 26 10 14 23 30 12 27 32 21 11 7 5 19 22 12 6 21 27 11 7 30 11 30 10 31 11 13 7 17 14 17 33 29 9 22 48 19 13 15 14 7 14 20 17 20 24 22 21 21 13 10 8 24 21 5 14 24 11 20 7 7 28 8 21 6 4 7 4 9 13 7 20 13 10 8 9 9 6 6 11 15 28 10 20 7 18 13 5 5 3 3 10 9 16 20 9 7 10 15 21 27 13 20 13 11 6 9 8 24 11 5 5 6 11 9 7 8 6 6 8 6 4 8 9 18 27 28 25 22 23 7 7 11 7 3 6 7 13 20 10 16 8 14 4 9 4 7 19 5 13 6 4 7 13 18 5 1 5 1 5 8 10 19 8 3 2 5 14 5 5 24 5 5 10 11 10 6 14 13 16 5 5 22 4 4 6 6 28 4 11 7 5 12 16 6 8 5 22 11 19 8 3 6 7 3 3 6 6 6 5 3 1 3 2 4 6 5 19 4 6 8 19 16 5 5 11 7 4 17 23 28 27 24 16 3 2 3 4 13 3 1 2 7 13 15 5 3 3 3 4 4 4 3 3

Alignment Information

BAC End 1

BAC End 2

seq1: chr3_158792570_158793700
seq2: B6Ng01-349H21.b_46_1172

seq1  GAATTCTATGTGAAGAGAGAGGTGGTAAGGCAGGAATAGAAAAGAGGTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATGTGAAGAGAGAGGTGGTAAGGCAGGAATAGAAAAGAGGTGA  50

seq1  GACTGGATGTTGGACTTGTCAGTGGGTCTCACATATTAACTAGAGACTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGGATGTTGGACTTGTCAGTGGGTCTCACATATTAACTAGAGACTGA  100

seq1  TCTATCATGAACCAATATTCAGATTTTCAAGCTAAATCTTCCCACACAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCATGAACCAATATTCAGATTTTCAAGCTAAATCTTCCCACACAGC  150

seq1  AGAGGCAATCTATGACACTTCAGTGTAGCTTTGGTTTAATCTATCATCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCAATCTATGACACTTCAGTGTAGCTTTGGTTTAATCTATCATCCA  200

seq1  GTTATTGTGTCTGACTAACAGAATTCTGGGAAAAACTCCAGTGCAAACTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTGTGTCTGACTAACAGAATTCTGGGAAAAACTCCAGTGCAAACTC  250

seq1  TACCCTCCAAAATAGTTCTGTTATCAAATACATTTTAGCTGAAGACCAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCTCCAAAATAGTTCTGTTATCAAATACATTTTAGCTGAAGACCAAC  300

seq1  CCTAGTGAAAACAACCCATCAATTACTACTAGTATCTTCCAATATTTAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGTGAAAACAACCCATCAATTACTACTAGTATCTTCCAATATTTAGA  350

seq1  TTTAAATTCATTATATGAAATGGTATATAAAAACCAGATCTAAAGTAGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATTCATTATATGAAATGGTATATAAAAACCAGATCTAAAGTAGTA  400

seq1  AGATAATACCATTCTCATTTATTTTAAGGTCCACCTTTTTAAAAGACAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAATACCATTCTCATTTATTTTAAGGTCCACCTTTTTAAAAGACAAC  450

seq1  TTCTTAGGTCATATAGTATATTTTTAGTTTCATAACTATATATCAGAACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAGGTCATATAGTATATTTTTAGTTTCATAACTATATATCAGAACT  500

seq1  CAAACTCAGATGGATATTTCTAATTTGTAAATTTGTCCATTTCTATTACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTCAGATGGATATTTCTAATTTGTAAATTTGTCCATTTCTATTACC  550

seq1  TATTGAGAAAGAAAATGCAGCCTGTGATGAATACGGCACAACTATCTGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGAGAAAGAAAATGCAGCCTGTGATGAATACGGCACAACTATCTGTG  600

seq1  GTCTGACAAACCTTGACCTTCTTGTCTACTTCTTGCCCACCCCTTGCCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGACAAACCTTGACCTTCTTGTCTACTTCTTGCCCACCCCTTGCCCT  650

seq1  TAACTAATAGAACCTTAACTGTTGTTTGTTTGTTTGTTTTGGTAGAGTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTAATAGAACCTTAACTGTTGTTTGTTTGTTTGTTTTGGTAGAGTTC  700

seq1  TCTGTATCTCATATTGGTCACATCATTGTGTGTTCCATTTCAGTCATTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTATCTCATATTGGTCACATCATTGTGTGTTCCATTTCAGTCATTAA  750

seq1  ATCATGGAAACTTTTTTCTCCATGGCAACTGATTTTTCTTCACATGGAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGGAAACTTTTTTCTCCATGGCAACTGATTTTTCTTCACATGGAGA  800

seq1  TATTTATTGCCAATGATATAGAAAAGGGAACTTTGCTAATAAAGAATGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATTGCCAATGATATAGAAAAGGGAACTTTGCTAATAAAGAATGCT  850

seq1  GTTTATGAATAAGAAGCCAAGCTCTGAAGAGAATTTTAAGTCTTGCTTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATGAATAAGAAGCCAAGCTCTGAAGAGAATTTTAAGTCTTGCTTTT  900

seq1  ATTCTTTACTTTTTTGAATTGAAGTCTGATTCTGTTGAAGTCATTTTGTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTTACTTTTTTGAATTGAAGTCTGATTCTGTTGAAGTCATTTTGTG  950

seq1  ATCATAAGTGAACAAAGCTAGATGATAGA-TAATATACTA-TATTACTAG  998
      ||||| |||||   ||||||||||||||| |||||||||| |||||||||
seq2  ATCAT-AGTGA--CAAGCTAGATGATAGATTAATATACTATTATTACTAG  997

seq1  TGGAATAAAGAGGGCATTAGAAC-TTTTGTACTAACTACTAAACTACTGG  1047
      ||||||||||||||||||||||| ||||||||| |||||||||||||| |
seq2  TGGAATAAAGAGGGCATTAGAACTTTTTGTACT-ACTACTAAACTACT-G  1045

seq1  ATGCTTGATTTAAAGCCAACCATTATGGTCATAGGAGTATTTGTTTTCAA  1097
      |||| ||||||||   ||||||||||||||||| ||||||||| |||  |
seq2  ATGC-TGATTTAA--GCAACCATTATGGTCATA-GAGTATTTGGTTTTCA  1091

seq1  AGAAGT-AGGAT-CTCATTTGTTGTGGTCT-GTATAT  1131
       ||||| ||||| |||||||| |||||||| ||||||
seq2  GGAAGTAAGGATCCTCATTTG-TGTGGTCTGGTATAT  1127

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information