BAC Information

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BAC

Clone NameB6Ng01-349P17
Chromosome3 (Build37)
Map Location 132,068,340 - 132,069,342
singlet/doubletsinglet
Overlap genenone
Upstream genePapss1, Olfr375-ps1, Dkk2, LOC100039018
Downstream geneEG433653, LOC668857, Scye1, A630047E20Rik, LOC668858, Npnt, Gstcd, Ints12, 9130221D24Rik, Ppa2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-349P17.bB6Ng01-349P17.g
ACCGA130800GA130801
length1,0081,183
definitionB6Ng01-349P17.b B6Ng01-349P17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccagcctccagaaataaaacatgttctgtcatttgaagccactga
gttttggataatttgttgcatcagcccaaggaaactaatacaagaataaa
ctaaaatcattattactttagtcattttttaaaaaatatagtaacataaa
ataaaagaaggacacaattctaactggcttcgcgatcgtgtgtgatggaa
acggacaacgtcagaagctctcattagtcacgttttttaagagatgatga
tggaaagccatacagcactggcggaggctattcagttagggaatgagcta
gggtcagtgggaggcagcaaggcactcagtcttctctgccactttccaac
tgtggtacatggacgagttcctccaactctctaactctggaaatggtaga
cgatcgatcataaagtcctccctaggggaataatgcatgtaaaactcttc
ggctctgcctgaacagagcgctcaggaagtgctatagattatgcatgggc
gtcttaatcatggtttagaggaaaacaaagttatgcaaatagggcatgga
actaatatgggttggagagagcatgaagggcgcaccaggaaaaatgttcc
caatttctttttttttttttttttttccattttttattaggtattttgct
cagttacatttgcaatgctataccaaaagtcccccatagccacccacccc
ctctcccctacccacccactcccgttttatggccctggcgttcccctgtc
ctggggcatataaagtttgcgtgtccaatgggcctctctttccagagatg
gccgattatgccatcttttgatgcatatgcagctagaggtaacgagctcc
aggatactggtgagtccttaagatggtaccaactatagggttggagatca
ctaaagctgccttggtactattctcttactccttgtgtgggggacaagtg
tatccatcaatagtcagactggtaagcatgcacttctatgtttgctaggc
ccacgcat
gaattccagtctgtgtattattttgttcatgttcaattacaacaaccaaa
acaaggaaggagactcagtgcacttggaagaaaataattacagaatctat
acttccatttgtcttagagagaaatacaattttaattttatagtcagagt
aagaatgtacagtactttgtaaaaaaaaaagtgtgtgtgtgtgtgctggt
ttctcctttggtctgaaacttccttagtgatggtaaattcctgtgtaagg
gactgacttagcttttccaatcttactgaattccaagcccttgatcttag
tcaaggacgttctaggactgttggaacactggcagaaggctttagccatg
tcagaattcaattttaaaaagcacttataataggaaaatactgaaagaga
gcacgtggatccatacactagactaacgcggtaatggaacgcgggaatga
aaaattaatgtatgggtagagaatgctagattccaggaggagagcttcct
tgaaactcttttgcctcatgagtgacttttaagcctttcggcttgtccag
ctgactcgaccgaagagcgtagcagaaacccactactcagttgactttgt
ggcttttctatttgtactcagtccaagtccacagtccctggaaatggcac
tgtccgtatttagggtgagcctttcctttttttggttctctttagaaatt
taatgacctcactaacataaccagaggtttgtctcctgggggatatttta
aatccattactctgacaatgggcttaactagcattgatggttgtgcacca
gaaatctcaaagtataagtgtcaatcaaatcaacaatgggattaattcct
catcacggtcataagtaacacagtaaatagaaagagttctgaaagaacct
agtggggaaaacccccactcaattcccgtttggcgtgcactcaagaatca
cgaacagatgaccatcttgatgttaaaagcatgatgtagttttattgaac
ggagcctccgggccgatcccgtatctcccactaggatgatgaaggggttg
atctcacatggagggaagcaattatagcggatagctctcagtcgaaacat
tatcttcacacacaggtgaacacatgtgatttccgaaccattgctttgaa
gctttaggttttttatatagaaaacgtgtgtgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_132068340_132069342
seq2: B6Ng01-349P17.b_45_1052

seq1  GAATTCCAGCCTCCAGAAATAAAACAT-TTCTGTCATTTGAAGCCACTGA  49
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GAATTCCAGCCTCCAGAAATAAAACATGTTCTGTCATTTGAAGCCACTGA  50

seq1  GTTTTGGATAATTTGTTGCATCAGCCCAAGGAAACTAATACAAGAATAAA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGGATAATTTGTTGCATCAGCCCAAGGAAACTAATACAAGAATAAA  100

seq1  CTAAAATCATTATTACTTTAGTCATTTTTTAAAAAATATAGTAACATAAA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAATCATTATTACTTTAGTCATTTTTTAAAAAATATAGTAACATAAA  150

seq1  ATAAAAGAAGGACACAATTCTAACTGGCTTCGCGATCGTGTGTGATGGAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAGAAGGACACAATTCTAACTGGCTTCGCGATCGTGTGTGATGGAA  200

seq1  ACGGACAACGTCAGAAGCTCTCATTAGTCACGTTTTTTAAGAGATGATGA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGACAACGTCAGAAGCTCTCATTAGTCACGTTTTTTAAGAGATGATGA  250

seq1  TGGAAAGCCATACAGCACTGGCGGAGGCTATTCAGTTAGGGAATGAGCTA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAGCCATACAGCACTGGCGGAGGCTATTCAGTTAGGGAATGAGCTA  300

seq1  GGGTCAGTGGGAGGCAGCAAGGCACTCAGTCTTCTCTGCCACTTTCCAAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCAGTGGGAGGCAGCAAGGCACTCAGTCTTCTCTGCCACTTTCCAAC  350

seq1  TGTGGTACATGGACGAGTTCCTCCAACTCTCTAACTCTGGAAATGGTAGA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTACATGGACGAGTTCCTCCAACTCTCTAACTCTGGAAATGGTAGA  400

seq1  CGATCGATCATAAAGTCCTCCCTAGGGGAATAATGCATGTAAAACTCTTC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATCGATCATAAAGTCCTCCCTAGGGGAATAATGCATGTAAAACTCTTC  450

seq1  GGCTCTGCCTGAACAGAGCGCTCAGGAAGTGCTATAGATTATGCATGGGC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTGCCTGAACAGAGCGCTCAGGAAGTGCTATAGATTATGCATGGGC  500

seq1  GTCTTAATCATGGTTTAGAGGAAAACAAAGTTATGCAAATAGGGCATGGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTAATCATGGTTTAGAGGAAAACAAAGTTATGCAAATAGGGCATGGA  550

seq1  ACTAATATGGGTTGGAGAGAGCATGAAGGGCGCACCAGGAAAAATGTTCC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATATGGGTTGGAGAGAGCATGAAGGGCGCACCAGGAAAAATGTTCC  600

seq1  CAATTTCTTTTTTTTTTTTTTTTTTTCCATTTTTTATTAGGTATTTTGCT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTCTTTTTTTTTTTTTTTTTTTCCATTTTTTATTAGGTATTTTGCT  650

seq1  CATTTACATTTGCAATGCTATACCAAAAGTCCCCCATAGCCACCCACCCC  699
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTACATTTGCAATGCTATACCAAAAGTCCCCCATAGCCACCCACCCC  700

seq1  CTCTCCCCTACCCACCCACTCCCCTTTTATGGCCCTGGCGTTCCCCTGTA  749
      ||||||||||||||||||||||| ||||||||||||||||||||||||| 
seq2  CTCTCCCCTACCCACCCACTCCCGTTTTATGGCCCTGGCGTTCCCCTGTC  750

seq1  CTGGGGCATATAAAGTTTGCGTGTCCAATGGGCCTCTCTTTCCAGTGATG  799
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CTGGGGCATATAAAGTTTGCGTGTCCAATGGGCCTCTCTTTCCAGAGATG  800

seq1  GCCGACTAGGCCATCTTTTGATGCATATGCAGCTAGA-GTCAAGAGCTCC  848
      ||||| || |||||||||||||||||||||||||||| || | |||||||
seq2  GCCGATTATGCCATCTTTTGATGCATATGCAGCTAGAGGTAACGAGCTCC  850

seq1  GGGATACTGGTTAGTTCATAATGTTGTTCCACCTATAGGGTTGCAGATCC  898
       |||||||||| ||| | |||  | || ||| ||||||||||| ||||| 
seq2  AGGATACTGGTGAGTCCTTAAGATGGTACCAACTATAGGGTTGGAGATCA  900

seq1  CTTTAGCTTCTTTGGTACT-TTCTCTAGCTCCTTCATTGGGGGCCATGTG  947
      ||  |||| | |||||||| ||||||  ||||||   |||||| || |||
seq2  CTAAAGCTGCCTTGGTACTATTCTCTTACTCCTTGTGTGGGGGACAAGTG  950

seq1  -ATCCATCCAATAG-CCGACT-GTGAGCATCCACTTCTATGTTTGCTAGG  994
       |||||| |||||| | |||| || ||||| |||||||||||||||||||
seq2  TATCCAT-CAATAGTCAGACTGGTAAGCATGCACTTCTATGTTTGCTAGG  999

seq1  CCCAGGCAT  1003
      |||| ||||
seq2  CCCACGCAT  1008