BAC Information

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BAC

Clone NameB6Ng01-350C24
Chromosome3 (Build37)
Map Location 47,356,300 - 47,357,341
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC545517, LOC383849, LOC383850, LOC100039426
Downstream geneLOC666202, LOC666208
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-350C24.bB6Ng01-350C24.g
ACCGA130938GA130939
length1,073494
definitionB6Ng01-350C24.b B6Ng01-350C24.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcacttgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tctagctcacaccagtcagaatggctaagatcaaaaaatatatttctgaa
gacttcctgaattaattctaggctattctgtatgcagcctttttatttat
ttatttgttatttatttatttatttatttatttatttatcaatagatcat
tgccaaaaactatagtaatagaattatcagaaatgtttggataggaatta
aaaatctgagatcacagagtgtgcctgcaaaattgatcttttaaagctat
tgaaaaatgtgaagttctaacatgtaaagctgacctttagacaagtgaca
gtaacaatgtcttttgaagaacagaatattgttattcagacatgtataat
gtatacacacacacacacacacatatacacgcacacacacacacacatac
acacacacacacacacacacacacatatacacacatacatatataaaatc
tgtggagacagttttaagtattcaagggaaactagactattctttttctt
tttttattagatatattcttcatttacatttcaaatgctgtccccaaagc
cccctatatcctccccctgccctgcaccccaacccacccactcctgcttc
ctggtcctggcattcccctgtactagggcatatgatcttcccaagaccaa
gcgcctctcctcccattgatggccgactaggccatctgctgctacatgtg
catctagagacaaagctctagtgcatactggttagttcatattattgttc
ctcctatagggttgcagacccctttagctccttgggtactttctcaagct
ccttcattagggaccctgtgatccatccaattgatgactgtgagcatcca
ttttctttatttcccaggcattagcatagcctcaaaagagatagctatat
caggttctgtcagcaaatctgctgcatatgcatagtgttctgtgtttgtg
ctgtatatgatgattccggtgag

tgattgcatgaggtggggtggagccagatgaggtcagttggtgagagtat
aggagttgttgttttagctcttgtcctaaagaaaagctagttttgtaaga
gaagctgttgtaagagagatgtaagagagaagctgcaagaaggatggagt
aagaagaagctgatggggaagagagctgtagagggaaaagcccaaagtaa
agaagttgctgtgtgaacccaccttggtgtccatgtcattcttgtctcca
tgggttggagactgtggagaccgggacaggccccccagtggaggagctag
agaaagtacccaaggagctaaaggggtctgcaaccctataggtggaacaa
caatatgaaccaaccagtacccccagagcttgtgtccctagctgcatata
tagcagaagatggcctaatcggccatcattgggaagagaggccccttagt
cttgcaaactttatatgcctcagtaaaggggaatgccagggcca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_47356300_47357341
seq2: B6Ng01-350C24.b_94_1125 (reverse)

seq1  CTCACCCGGGAATCCATTCCATATACAGCCACCAAACACAG-ACACTATT  49
      ||||||  ||||| |||  ||||||||||   ||||||||| |||||| |
seq2  CTCACC--GGAAT-CAT--CATATACAGC--ACAAACACAGAACACTA-T  42

seq1  GCATATGCCAGCAAGATTTTGCTGACAGAACCCTGATATAGCTATCTCTT  99
      ||||||| |||| ||| ||||||||||||| |||||||||||||||||||
seq2  GCATATG-CAGC-AGA-TTTGCTGACAGAA-CCTGATATAGCTATCTCTT  88

seq1  TTGAGGCTATGCTAATGCCTGGGAAATAAAG-AAATGGATGCTCACAGTC  148
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TTGAGGCTATGCTAATGCCTGGGAAATAAAGAAAATGGATGCTCACAGTC  138

seq1  ATCAATTGGATGGATCACAGGGTCCCTAATGAAGGAGCTTGAGAAAGTAC  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATTGGATGGATCACAGGGTCCCTAATGAAGGAGCTTGAGAAAGTAC  188

seq1  CCAAGGAGCTAAAGGGGTCTGCAACCCTATAGGAGGAACAATAATATGAA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGGAGCTAAAGGGGTCTGCAACCCTATAGGAGGAACAATAATATGAA  238

seq1  CTAACCAGTATGCACTAGAGCTTTGTCTCTAGATGCACATGTAGCAGCAG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACCAGTATGCACTAGAGCTTTGTCTCTAGATGCACATGTAGCAGCAG  288

seq1  ATGGCCTAGTCGGCCATCAATGGGAGGAGAGGCGCTTGGTCTTGGGAAGA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCCTAGTCGGCCATCAATGGGAGGAGAGGCGCTTGGTCTTGGGAAGA  338

seq1  TCATATGCCCTAGTACAGGGGAATGCCAGGACCAGGAAGCAGGAGTGGGT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATGCCCTAGTACAGGGGAATGCCAGGACCAGGAAGCAGGAGTGGGT  388

seq1  GGGTTGGGGTGCAGGGCAGGGGGAGGATATAGGGGGCTTTGGGGACAGCA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTGGGGTGCAGGGCAGGGGGAGGATATAGGGGGCTTTGGGGACAGCA  438

seq1  TTTGAAATGTAAATGAAGAATATATCTAATAAAAAAAGAAAAAGAATAGT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAATGTAAATGAAGAATATATCTAATAAAAAAAGAAAAAGAATAGT  488

seq1  CTAGTTTCCCTTGAATACTTAAAACTGTCTCCACAGATTTTATATATGTA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTTCCCTTGAATACTTAAAACTGTCTCCACAGATTTTATATATGTA  538

seq1  TGTGTGTATATGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTATATGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTG  588

seq1  TGTGCGTGTATATGTGTGTGTGTGTGTGTGTATACATTATACATGTCTGA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCGTGTATATGTGTGTGTGTGTGTGTGTATACATTATACATGTCTGA  638

seq1  ATAACAATATTCTGTTCTTCAAAAGACATTGTTACTGTCACTTGTCTAAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACAATATTCTGTTCTTCAAAAGACATTGTTACTGTCACTTGTCTAAA  688

seq1  GGTCAGCTTTACATGTTAGAACTTCACATTTTTCAATAGCTTTAAAAGAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAGCTTTACATGTTAGAACTTCACATTTTTCAATAGCTTTAAAAGAT  738

seq1  CAATTTTGCAGGCACACTCTGTGATCTCAGATTTTTAATTCCTATCCAAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTTGCAGGCACACTCTGTGATCTCAGATTTTTAATTCCTATCCAAA  788

seq1  CATTTCTGATAATTCTATTACTATAGTTTTTGGCAATGATCTATTGATAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCTGATAATTCTATTACTATAGTTTTTGGCAATGATCTATTGATAA  838

seq1  ATAAATAAATAAATAAATAAATAAATAACAAATAAATAAATAAAAAGGCT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATAAATAAATAAATAAATAAATAACAAATAAATAAATAAAAAGGCT  888

seq1  GCATACAGAATAGCCTAGAATTAATTCAGGAAGTCTTCAGAAATATATTT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATACAGAATAGCCTAGAATTAATTCAGGAAGTCTTCAGAAATATATTT  938

seq1  TTTGATCTTAGCCATTCTGACTGGTGTGAGCTAGAATCTCAGGGTTGTTT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATCTTAGCCATTCTGACTGGTGTGAGCTAGAATCTCAGGGTTGTTT  988

seq1  TGATTTGCATTTCCCTGATGATTAAGGATGTTGAACATTTTTTC  1042
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTGCATTTCCCTGATGATTAAGGATGTTGAACATTTTTTC  1032


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