BAC Information

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BAC

Clone NameB6Ng01-350M03
Chromosome3 (Build37)
Map Location 132,499,292 - 132,500,358
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr375-ps1, Dkk2, LOC100039018, EG433653, LOC668857, Scye1, A630047E20Rik
Downstream geneLOC668858, Npnt, Gstcd, Ints12, 9130221D24Rik, Ppa2, E130014J05Rik, EG620205, LOC100039168
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-350M03.bB6Ng01-350M03.g
ACCGA131340GA131341
length1,2631,061
definitionB6Ng01-350M03.b B6Ng01-350M03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccttaaaacaatgaaggctcaagccttctaaaaggtgccagttgg
aagagatctgcgagtgaagagagttcccaacctcttcgcatccctcagtc
ttcactgaacccatgctctaacctcttcgcatctgactctcttcactgga
cgacaccttgctccttcaggggactataaactctcttggggcagccttga
tcttgtctccagctgaaatcctggtacctagagatgaccatttgtagact
ctatgatgaatattcgttgggataaaagaactaaataatgaagcacttgt
catttctggaggttgaaagttagacatttgattctcatttgtcatttcta
ccacggtgccaccaatggcagatattttttttttgtatgtgtgaaacttg
ggattactcctggtaaggtgttatgtatcaggaaacctaaccaaccattt
gtcctacaggttaagtgcggctattgctaaaagcaggatatttgatctcg
ttcctgctgatgtgttttaaggctgaaatgaaagagtggggcagaggatg
cagctcaatggttagagggctcgcctagcatgcacggaaccttggattta
atctccaacacagaacgaacaagagtgatcaagttggtgaagccgtctgg
gaatcccatggctttttttccctttcattgagagaccaaatcttttgggt
tcagactccatcttagaaaaccggacctcaaggttgaactcaagttaact
aacaggctggttagcaccagtttccaggctaccccccaacaagacctgtg
tctaacaccagtttctaggttattccccatcaagttgcacctccaggtta
caggcctgcccctggcacttcactttcctaacaaccaccaatcaggagga
aagcagaagttaagtttatggtttggcttcctagcaccagcccaattacg
tttaaaggccataatgccacccaatcagatgttgtaccaggctagatacc
ttgcttcttgcctctattatgggctgggaaggctccctcctgttctctgc
atcatagacagtggtgtgtggcccaagtctcggcttgaagtaaaggagat
tcctagtggagaattgcattgggattcagccctgggtgattctttggggg
gttcatggagtgttctctggtcacacacccaatttcctttcgttccatta
gttatgatcatagtgtctgtattatcaccgcatgggtgaattccctctat
gctgtgctactct
gaattcctactcacttcaggagtcagtaatgaaagagtgatggagtatga
agggggatgagacagcttccccaacacctgttaaatccagaaactcttaa
gcgccctaaacaactgctcttataatcccatactgcattccattcattgt
ttccttaccatttcctccattcataagcaccccaaacctagaacagtgta
gagtattgactagatgctcagggaaacgcatgactagtagatgagcaagt
aaatgagcagatggaaaagaaggctggagttggaaaagatggaggaatat
cactatggttctgctacaggaccagtattaagcatgaatgattggaacca
caaagattcagagcagaactcccaacctcacatggaaatccaacagctgc
ttttttgtcccccttctactgaaattcagcttgcatcctgtcacggcaat
ccgaactgctctgtctcctggtgctccaccattctgcttgccttttcaga
cctgtttgagatcgcccctctgcctcttttgccatcccagtgtctcagct
ttacagcaaccccgtgttcttcatctacaatagacgtctttccagcttga
cagcattcgttaagagattagtcaagggtgcagtggtccttctctactca
ttttcttacttccagagtgttcttaagtgctgaaagctgagggcttaccc
acaaggcccttttggtaatgctatgttatctaggatttccaagttccatg
gtaattgtacagctgcgtgtgggaaatgcagctgtgtcagtaatcatacg
gtaagaggcaatgctgcctgtgcattcaggtggatgaatctgctgccact
ggtcttgaggaccaagctccaaagactagtgagccagcagggcagggaga
tgcctgccagcttccaacgtgcagtagcaacaatttctccagcactgctt
aggactgaagatccccatctggattttgactgtaaatggcacttgactct
tggggctgcagagcatgtgagaagagcattggtcagcaatactgacggcc
attatctgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_132499292_132500358
seq2: B6Ng01-350M03.g_68_1128

seq1  GAATTCCTACTCACTTCAGGAGTCAGTAATGAAAGAGTGATGGAGTATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTACTCACTTCAGGAGTCAGTAATGAAAGAGTGATGGAGTATGA  50

seq1  AGGGGGATGAGACAGCTTCCCCAACACCTGTTAAATCCAGAAACTCTTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGGATGAGACAGCTTCCCCAACACCTGTTAAATCCAGAAACTCTTAA  100

seq1  GCGCCCTAAACAACTGCTCTTATAATCCCATACTGCATTCCATTCATTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCCCTAAACAACTGCTCTTATAATCCCATACTGCATTCCATTCATTGT  150

seq1  TTCCTTACCATTTCCTCCATTCATAAGCACCCCAAACCTAGAACAGTGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTACCATTTCCTCCATTCATAAGCACCCCAAACCTAGAACAGTGTA  200

seq1  GAGTATTGACTAGATGCTCAGGGAAACGCATGACTAGTAGATGAGCAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTATTGACTAGATGCTCAGGGAAACGCATGACTAGTAGATGAGCAAGT  250

seq1  AAATGAGCAGATGGAAAAGAAGGCTGGAGTTGGAAAAGATGGAGGAATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAGCAGATGGAAAAGAAGGCTGGAGTTGGAAAAGATGGAGGAATAT  300

seq1  CACTATGGTTCTGCTACAGGACCAGTATTAAGCATGAATGATTGGAACCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTATGGTTCTGCTACAGGACCAGTATTAAGCATGAATGATTGGAACCA  350

seq1  CAAAGATTCAGAGCAGAACTCCCAACCTCACATGGAAATCCAACAGCTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGATTCAGAGCAGAACTCCCAACCTCACATGGAAATCCAACAGCTGC  400

seq1  TTTTTTGTCCCCCTTCTACTGAAATTCAGCTTGCATCCTGTCACGGCAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGTCCCCCTTCTACTGAAATTCAGCTTGCATCCTGTCACGGCAAT  450

seq1  CCGAACTGCTCTGTCTCCTGGTGCTCCACCATTCTGCTTGCCTTTTCAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAACTGCTCTGTCTCCTGGTGCTCCACCATTCTGCTTGCCTTTTCAGA  500

seq1  CCTGTTTGAGATCGCCCCTCTGCCTCTTTTGCCATCCCAGTGTCTCAGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTTGAGATCGCCCCTCTGCCTCTTTTGCCATCCCAGTGTCTCAGCT  550

seq1  TTACAGCAACCCCGTGTTCTTCATCTACAATAGACGTCTTTCCAGCTTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGCAACCCCGTGTTCTTCATCTACAATAGACGTCTTTCCAGCTTGA  600

seq1  CAGCATTCGTTAAGAGATTAGTCAAGGGTGCAGTGGTCCTTCTCTACTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATTCGTTAAGAGATTAGTCAAGGGTGCAGTGGTCCTTCTCTACTCA  650

seq1  TTTTCTTACTTCCAGAGTGTTCTTAAGTGCTGAAAGCTGAGGGCTTACCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTACTTCCAGAGTGTTCTTAAGTGCTGAAAGCTGAGGGCTTACCC  700

seq1  ACAAGGCCCTTTTGGTAATGCTATGTTATCTAGGATTTCCAAGTTCCATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGCCCTTTTGGTAATGCTATGTTATCTAGGATTTCCAAGTTCCATG  750

seq1  GTAATTGTACAGCTGCGTGTGGGAAATGCAGCTGTGTCAGTAATCATACG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTGTACAGCTGCGTGTGGGAAATGCAGCTGTGTCAGTAATCATACG  800

seq1  GTAAGAGGCAATGCTGCCTGTGCATTCAGGTGGATGAATCTGCTGCCACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGAGGCAATGCTGCCTGTGCATTCAGGTGGATGAATCTGCTGCCACT  850

seq1  GGTCTTGAGGACCAAGCTCCAAAGACTAGTGAGCCAGCAGGGCAGGGAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTTGAGGACCAAGCTCCAAAGACTAGTGAGCCAGCAGGGCAGGGAGA  900

seq1  TGCCTGCCAGCTTCCAACGTGCAGTAGC-ACAATTTCTCCAGCACTGCTT  949
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TGCCTGCCAGCTTCCAACGTGCAGTAGCAACAATTTCTCCAGCACTGCTT  950

seq1  AGGACTGAAGATCCCCATCTGGATTTGAACTGTAAATGGCCACTTGACTC  999
      ||||||||||||||||||||||||||  ||||||||||| ||||||||||
seq2  AGGACTGAAGATCCCCATCTGGATTTTGACTGTAAATGG-CACTTGACTC  999

seq1  TTGGGGGCCTGCAGAGCATGGTGGAGAAAGAGGCATGGTCAGCAATACTG  1049
      ||||||  ||||||||||||   ||| |||||   |||||||||||||||
seq2  TTGGGG--CTGCAGAGCATG--TGAG-AAGAGCATTGGTCAGCAATACTG  1044

seq1  ACGGCCATTTATCTGTGT  1067
      ||||||| ||||||||||
seq2  ACGGCCA-TTATCTGTGT  1061