GCGGCGCTAATACACTCCTATTTCGAGAGAATCCGCGGAATTCATTGATT
ACCTCTAATAACTGTGGCAGAGTTTTTAAAGAGCTTTTAATTTGGAAGAT
CATTTCTAGTTCACAGAGTAGTGATAACTAGACTTTTTTTTTTCAATTTA
GTAATCTTTATTTCTTGCTTAATTTCACTGGCTTGGACTTATGACACCAT
TTTGGATAAAAGTAGGCATTTAGGCATCTTGTTTGATTTCAGATCTTCAA
AGAGAAATCTTATATCTTTTCCCATTCAACAAAATTTTAACTTTTGGCTT
AGTATAAATAACTTTTATTGGGTTAAAATGTATTCCTTGTATACTAAATC
TGCTCTACATATTTTTATTGTACAGAATTGAATTCTTAGTTTTTTTTCTG
TATCAGTTAAGATAAACATGTGGTTATTTCTGTTGATCTAATCATGTTGC
ATTAGTTAGTGCACACTGAACCATCTTTACATTTCTGGGATGAATATCAC
TTGATCACGATGAACAACTTATTATTTATTTATTTGATATAGCATTAGCT
ATTGTAACCTCTAGAGATTGCTTAGAGCATATGAGATGATGTCTAAAAAT
CATGTGAAAACACTCCCATTCATAAAAAGTGACCTGAGTGTCCTTGGACT
TTGGTTTTCATATGGGACATGGA

CGATTGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXGGTAAGTGGCCACTGGCCACTTCTC
TGATTGGGCCTGGGTGTCGCAGGGGAGAGTTTAGGCATCTCAGGAGTACC
GGATCAGAGCATTTGCCAGCAGGGGAAGGTTAAGGAGTGTCCAGCCTTTG
AACTAGTCCCGGCATGTCCAAAATTAACTGGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCCTCCCCTCCCCCCTTC
TCCCCCCTTTCCCCCCTCCCTCTTTTTCCCCCCCCCTCTTTCCCTTTTCT
CCTCCCCTCACCTTTTTTTCCTCTCTTCCCCCCCTCCTCTCCCTTCCCTT
CCCCTTCCCCCCCCCTTCCCCCTTTCGTTTCCCCCTCTCTCTCTTTTTTT
TCTCTGTTAATACTCCCTACCCCCTCCTCGTCCCTTTCGCCCTCTCGCCC
CGCTTCGCGCTCTCTCTGCCTTCCCTCTCTTTCCCCCTTCTCCCCCAACC
TTCTTCTCTCTTTTCTCTCTCCCTGCTCCCCTTCTCCCTTATTCTTCTTT
CCTTTTGCTCCCCCGGTCTTTCTCTTCTCACTCTCTCCTACCCCTCCCCA
CCCCTGTTTTTAGTCTTCTCCCCCCCCCCCCCCCCCCCTCACCCTCTCTC
CTCTTCTCTCTACCCCCCCCTCTCTCTCTTATCCCCCCCTGTTCTTGCTC
CCCTCTATCTCCTCTTTCCCTCTTCTTATCTATCCCTTTCTCCCGTCCCT
TTCCTTTCCTCCGTTTCTTTCCCCC

Query= MSMg01no045_c15.b1 MSMg01no045_c15.b1 CHROMAT_FILE:
MSMg01no045_c15.b1 PHD_FILE: MSMg01no045_c15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:05:03 2005
         (603 letters)



>mm_chr3_34024296_34025298
          Length = 1003

 Score = 1050 bits (543), Expect = 0.0
 Identities = 584/603 (96%), Gaps = 10/603 (1%)
 Strand = Plus / Plus

                                                                       
Query: 6   gaattcattgattacctctaataactgtggcagagtttttaaagag---------ctttt 56
           |||||| |||||||  ||||||||||||||||||||||||||||||         |||||
Sbjct: 198 gaattcgttgattagttctaataactgtggcagagtttttaaagagtttaaagagctttt 257

                                                                       
Query: 57  aatttggaagatcatttctagttcacagagtagtgataactagacttttttttttcaatt 116
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 aatttggaagatcatttctagttcacagagtagtgataactagacttttttttttcaatt 317

                                                                       
Query: 117 tagtaatctttatttcttgcttaatttcactggcttggacttatgacaccattttggata 176
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 tagtaatctttatttcttgcttaatttcactggcttggacttatgacaccattttggata 377

                                                                       
Query: 177 aaagtaggcatttaggcatcttgtttgatttcagatcttcaaagagaaatcttatatctt 236
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 aaagtaggcatttaggcatcttgtttgatttcagatcttcaaagagaaatcttatatctt 437

                                                                       
Query: 237 ttcccattcaacaaaattttaacttttggcttagtataaataacttttattgggttaaaa 296
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 438 ttcccattcaacaaaattttaacttttggcttagtataagtaacttttattgggttaaaa 497

                                                                       
Query: 297 tgtattccttgtatactaaatctgctctacatatttttattgtacagaattgaattctta 356
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 498 tgtattccttgtatactaaatctgctctgcatatttttattgtacagaattgaattctta 557

                                                                       
Query: 357 gttttttttctgtatcagttaagataaacatgtggttatttctgttgatctaatcatgtt 416
           |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 558 gttttttt-ctgtatcagttaagataaacatgtggttctttctgttgatctaatcatgtt 616

                                                                       
Query: 417 gcattagttagtgcacactgaaccatctttacatttctgggatgaatatcacttgatcac 476
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 gcattagttagtgcacactgaaccatctttacatttctgggatgaatatcacttgatcac 676

                                                                       
Query: 477 gatgaacaacttattatttatttatttgatatagcattagctattgtaacctctagagat 536
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 gatgaacaacttattatttgtttatttgatatagcattagctattgtaacctctagagat 736

                                                                       
Query: 537 tgcttagagcatatgagatgatgtctaaaaatcatgtgaaaacactcccattcataaaaa 596
           |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||
Sbjct: 737 tgcttagagcatatgagatgatgtataaaaatcacgtgaaaacactcccattcataaaaa 796

              
Query: 597 gtg 599
           |||
Sbjct: 797 gtg 799


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 603
Length of database: 1003
Length adjustment: 10
Effective length of query: 593
Effective length of database: 993
Effective search space:   588849
Effective search space used:   588849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)