TATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCTTCAGAGAGCATAGGAAAGGTTGAGCAAAGTATGAAAATCATGATTCA
CATTTCTTACTCAGCAAAACTATGAGTTACTGTCTCTGCATTTTGGATAA
CATAATTTGCAGAAAAGACTCCAGTTTAAAAATCAGTATGCATGCATTTC
CTTTCTCCTATTCAGAGTTTCCAAACTTTAGATATGTAATAATATTTTGC
AACTAATAACAAATTGAAATCCAATACAAACTGTCTTGCTGCTCAAATTC
AAATATTTTCCAAGTTGTTGAGTCATCAAAAGGAAGAGCATGTGGTGTCC
TATCTGAAATGACTGCAAACAATCCAATTCAGAGATCTCACAGATGGAAA
CCACATCGGACAAGGAGTCTAAAACTGAATCTGGCCATCTGTGAGGCTTT
TATAGGACTAAGACATGTCAAAGACACTTTAATATTAACATGTGTTCCAT
GGAACAGAAATATACAGAGCTATTTTGCAAAATGATGTTAGTGGCACATA
CACATTTCAGTATTTTATGATGTCTTAGACATGAAGAGCATTAGTTAAGA
AGAGTTGGGATTTTAATATGTAAATCCCTGTTTGGCAGGGAGCATAATAA
TTACCATTGGATACAGTTCGACATAGGGTTCATTTAT

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTTTGTTTAGCTCCGAGCCCCATCTTT
TAAGGGAATTATTTGATTTTCTGGAGTCCACTCTCTTGAGTTCTTTATAT
ATATTGGATATTAGTCCCCTATCTGATTTAAGAAGACTTGTGATTCTTAT
GAAATTAATTTCTTCATTTTCCTTTATCCTCCCTTACCCAGCACACATAC
ACACACACACACACAGGCATACACATATGCACACACATGCACACACATGC
ATTCACACACACATACACACACACACACAGGCATACACATATGCACACAC
ATGCACACACATGCATTCACACACACACACACACACAGGCATACACATAT
GCACACACATGCACACACATGCATTCACACACACATACACACATGCACAT
ATATACACATATGCACACACATGCACACACATGCATTCACATACACACAC
ACACACACAGGCATACACATATGCACACACATGCACACACATGCATTCAC
ACACACACACACACACAGGCATACACATATGCACACACATGCACACACAT
GCATTCACACACACACACACACACAGGCATACACATATGCACACACATGC
ACACACATGCATTCACACACACACACACACACACAGGCATACACATAN

Query= MSMg01no045_j07.b1 MSMg01no045_j07.b1 CHROMAT_FILE:
MSMg01no045_j07.b1 PHD_FILE: MSMg01no045_j07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:05:34 2005
         (645 letters)



>mm_chr3_151122098_151123142
          Length = 1045

 Score = 1193 bits (617), Expect = 0.0
 Identities = 635/641 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcttcagagagcataggaaaggttgagcaaagtatgaaaatcatgattcacatttc 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 gaattcttcagagagcataggaaaggttgagcaaagtatgaaaatcatgattcacatttc 786

                                                                       
Query: 65  ttactcagcaaaactatgagttactgtctctgcattttggataacataatttgcagaaaa 124
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 785 ttactcagcaaaactatgagttactgtctctgcattttggataacatgatttgcagaaaa 726

                                                                       
Query: 125 gactccagtttaaaaatcagtatgcatgcatttcctttctcctattcagagtttccaaac 184
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 725 gactccagtttaaaaatcagtatgcatgcatttcctttctcatattcagagtttccaaac 666

                                                                       
Query: 185 tttagatatgtaataatattttgcaactaataacaaattgaaatccaatacaaactgtct 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 tttagatatgtaataatattttgcaactaataacaaattgaaatccaatacaaactgtct 606

                                                                       
Query: 245 tgctgctcaaattcaaatattttccaagttgttgagtcatcaaaaggaagagcatgtggt 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 tgctgctcaaattcaaatattttccaagttgttgagtcatcaaaaggaagagcatgtggt 546

                                                                       
Query: 305 gtcctatctgaaatgactgcaaacaatccaattcagagatctcacagatggaaaccacat 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 gtcctatctgaaatgactgcaaacaatccaattcagagatctcacagatggaaaccacat 486

                                                                       
Query: 365 cggacaaggagtctaaaactgaatctggccatctgtgaggcttttataggactaagacat 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 cggacaaggagtctaaaactgaatctggccatctgtgaggcttttataggactaagacat 426

                                                                       
Query: 425 gtcaaagacactttaatattaacatgtgttccatggaacagaaatatacagagctatttt 484
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 425 gtcaaagacactttaatattaacgtgtgttccatggaacagaaatatacagagctatttt 366

                                                                       
Query: 485 gcaaaatgatgttagtggcacatacacatttcagtattttatgatgtcttagacatgaag 544
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 365 gcaaaatgatgttagtggcacatacacatttcagtattttatgatgtcttagacattaag 306

                                                                       
Query: 545 agcattagttaagaagagttgggattttaatatgtaaatccctgtttggcagggagcata 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 agcattagttaagaagagttgggattttaatatgtaaatccctgtttggcagggagcata 246

                                                    
Query: 605 ataattaccattggatacagttcgacatagggttcatttat 645
           ||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 245 ataattaccattggatacagttcgacacaggattcatttat 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1045
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1035
Effective search space:   657225
Effective search space used:   657225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)