Query= MSMg01no047_d24.b1 MSMg01no047_d24.b1 CHROMAT_FILE:
MSMg01no047_d24.b1 PHD_FILE: MSMg01no047_d24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:07:33 2005
(448 letters)
>mm_chr3_127499495_127500342
Length = 848
Score = 820 bits (424), Expect = 0.0
Identities = 439/444 (98%)
Strand = Plus / Plus
Query: 5 gaattcagtttgttttacagccgtttaaacagttcaacagctccgttctctcgtttgaaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagtttgttttacagccgtttaaacagttcaacagctccgttctctcgtttgaaa 264
Query: 65 ttaaaaacatgagcaagaaaatcagtttgatggtagacaaccaggagcttggctacctca 124
| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 265 taaaaaacatgagcaagaaaaccagtttgatggtagacaaccaggagctcggctacctca 324
Query: 125 ataaaatggacctgccttacaagtgtatgctcaggttcggagagtatcagttcctgttgc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ataaaatggacctgccttacaagtgtatgctcaggttcggagagtatcagttcctgttgc 384
Query: 185 agaaggaagacggagagtcggtggaatcttttgagactcaatttatcatgtcttcaagac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agaaggaagacggagagtcggtggaatcttttgagactcaatttatcatgtcttcaagac 444
Query: 245 ctctcttgcaagaaaacaactggccaacacagaatcccataccagaggatgggatgtatt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctctcttgcaagaaaacaactggccaacacagaatcccataccagaggatgggatgtatt 504
Query: 305 cttcgtacttcacccacagaagttctccttcagaaatggatgaaaacgaactgtgaagag 364
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cttcatacttcacccacagaagttctccttcagaaatggatgaaaacgaactgtgaagag 564
Query: 365 ggtccaactggacacacattgaaggatgaggacacatgggtcggatgtcaagagacatcc 424
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ggtccaactggagacacattgaaggatgaggacacatgggtcggatgtcaagagacatcc 624
Query: 425 tacttccgagtttgtgagtgtagc 448
||||||||||||||||||||||||
Sbjct: 625 tacttccgagtttgtgagtgtagc 648
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 448
Length of database: 848
Length adjustment: 10
Effective length of query: 438
Effective length of database: 838
Effective search space: 367044
Effective search space used: 367044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no047_d24.g1 MSMg01no047_d24.g1 CHROMAT_FILE:
MSMg01no047_d24.g1 PHD_FILE: MSMg01no047_d24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:07:33 2005
(440 letters)
>mm_chr3_127637157_127637996
Length = 840
Score = 669 bits (346), Expect = 0.0
Identities = 349/350 (99%), Gaps = 1/350 (0%)
Strand = Plus / Minus
Query: 92 gtgagaattttggttt-aaaaaaaaaactcagctatgtcatgtaagtaggtttttctttt 150
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 gtgagaattttggtttaaaaaaaaaaactcagctatgtcatgtaagtaggtttttctttt 781
Query: 151 tattcccaggtgtgcttcagtttgtccacagcctttagctatgattgtctcctgctctag 210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 tattcccaggtgtgcttcagtttgtccacagcctttagctatgattgtctcctgctctag 721
Query: 211 gaggggcatgatccttgccagctgtagagagtttaattctggggactctggagagggaat 270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 gaggggcatgatccttgccagctgtagagagtttaattctggggactctggagagggaat 661
Query: 271 aaatgccaccgccccaagagaacttgaaggtagtgactgggatgggggtatctccaaaga 330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 aaatgccaccgccccaagagaacttgaaggtagtgactgggatgggggtatctccaaaga 601
Query: 331 agaagaaacagacagctgcaccccctattgttcctagttgctgttgttacaggttgttcc 390
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 agaagaaacagacagctgcaccccctattgttcctagttgctgttgttacaggttgttcc 541
Query: 391 tgagcacagagaggaaagaaagttggatatcctgatgacaaagattaggc 440
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 tgagcacagagaggaaagaaagttggatatcctgatgacaaagattaggc 491
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 440
Length of database: 840
Length adjustment: 9
Effective length of query: 431
Effective length of database: 831
Effective search space: 358161
Effective search space used: 358161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
