Query= MSMg01no050_l14.b1 MSMg01no050_l14.b1 CHROMAT_FILE:
MSMg01no050_l14.b1 PHD_FILE: MSMg01no050_l14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:49:25 2005
(400 letters)
>mm_chr3_157826271_157827070
Length = 800
Score = 687 bits (355), Expect = 0.0
Identities = 385/397 (96%), Gaps = 4/397 (1%)
Strand = Plus / Plus
Query: 1 ccagtggccacttccagcatgcctgtttttccagagtatgtgaattcatttgctaataat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ccagtggccacttccagcatgcctgtttttccagagtatgtgaattcatttgctaataat 264
Query: 61 gctgagttatacatacttataattatatatatatatataaatatatatattagggatggt 120
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 265 gctgagttatacatacttataattatatatatatat----atatatatattagggatggt 320
Query: 121 caaacacaaattttcactttcaagcttttagttcccactgtgacttcccatagcctcttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caaacacaaattttcactttcaagcttttagttcccactgtgacttcccatagcctcttc 380
Query: 181 ccactggccttgcatggatgccaggccctggacgttggttttgatgccctccaaagtccc 240
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 381 ccactggccttgcatggatgccaggccctggaagttggttttgatgccctccaaagtccc 440
Query: 241 aggtgagcccacatgcttacctgcatattctgtgttctgtgtaactcacatgccaaacac 300
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 441 aggtgagcccacatgcttacctgcatattctgtgttctgtgcaactcacatgccaaacac 500
Query: 301 aattccaacataaagccgattccactttctcaaaattgctgacaacgaacctttgggaac 360
|||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 501 aattccaacataaagcagattccactttgtcaaaattgctgacaacgaacatttgggaac 560
Query: 361 ccagaagctgacattctcaacacacctgttaccccac 397
||||||| || |||||||||||||||||||||||||
Sbjct: 561 ccagaaggggaaattctcaacacacctgttaccccac 597
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 400
Length of database: 800
Length adjustment: 9
Effective length of query: 391
Effective length of database: 791
Effective search space: 309281
Effective search space used: 309281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no050_l14.g1 MSMg01no050_l14.g1 CHROMAT_FILE:
MSMg01no050_l14.g1 PHD_FILE: MSMg01no050_l14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:49:25 2005
(280 letters)
>mm_chr3_157979431_157980110
Length = 680
Score = 511 bits (264), Expect = e-149
Identities = 276/280 (98%)
Strand = Plus / Minus
Query: 1 agatacccacaaataactaataatctctaagacactactcagagtagtgctttaattaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 agatacccacaaataactaataatctctaagacactactcagagtagtgctttaattaca 421
Query: 61 tgtgttattacagaatggcaggacctaattaagactgttgtattaatagaaaaggggtca 120
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 tgtgttattagagaatggcaggacctaattaagactgttgtattaatagaaaaggggtca 361
Query: 121 agttccagatttaacttgaaagagataatacatttgtaatcaggctcttaaacaatcttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 agttccagatttaacttgaaagagataatacatttgtaatcaggctcttaaacaatcttc 301
Query: 181 cacattaagctcactggccactgagttattttccatgacactaattcaagaaagactata 240
||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||||
Sbjct: 300 cacattaagctcactggccactgagttattttctatgagaataattcaagaaagactata 241
Query: 241 caggtgctcctgaatagcaaccagacttagacctatggac 280
||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 caggtgctcctgaatagcaaccagacttagacctatggac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 280
Length of database: 680
Length adjustment: 9
Effective length of query: 271
Effective length of database: 671
Effective search space: 181841
Effective search space used: 181841
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
