Query= MSMg01no051_b21.b1 MSMg01no051_b21.b1 CHROMAT_FILE:
MSMg01no051_b21.b1 PHD_FILE: MSMg01no051_b21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:50:20 2005
(627 letters)
>mm_chr3_78112256_78113281
Length = 1026
Score = 1085 bits (561), Expect = 0.0
Identities = 600/613 (97%), Gaps = 1/613 (0%)
Strand = Plus / Plus
Query: 15 gaattctaattccgtcactgaaatgtaacttactttctccaaatgacagagcagatatat 74
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 215 gaattctaattccgtcactgaaatggaacttactttctccaaatgacagagcagatatat 274
Query: 75 caccgtaaagcactaaagctattccctgctcctgctgcagtttaatggcaatggggatga 134
||| | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 275 cacaggaaagcactaaagctattccctgctcctgctgcagtttaatggcaatgaggatga 334
Query: 135 atgcagcatagcaaatatggtataaatattagatgggaaacagtgatgttaccattattc 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 atgcagcatagcaaatatggtataaatattagatgggaaacagtgatgttaccattattc 394
Query: 195 aaattgtccttcattatattcagctcagtaattttttatagctcatgcctgaaatagcat 254
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 aaattgtccttcattattttcagctcagtaattttttatagctcatgcctgaaatagcat 454
Query: 255 tatgcaatctacaatatatactaattgaaactatgtcagcagttagctttctatgaacta 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 tatgcaatctacaatatatactaattgaaactatgtcagcagttagctttctatgaacta 514
Query: 315 gtttaacttccacagggtttgattttgactaccacagtcctttagtattagtactttttt 374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 gtttaacttccacagggtttgattttgactaccacagtcctttagtattagtactttttt 574
Query: 375 tgcctgtgagtctttaattgtgcatgccataagcctgatggattctattcttattttgtg 434
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 -gcctgtgagtctttaattgtgcatgccataagcctgatggattctattcttattttgtg 633
Query: 435 aaattagaaggtacacctagcaacaagattttgtctgcttggtatatatttatcattacc 494
||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 634 aaattagaaggtagacctagcaagaagattttgtctgcttggtatatatttatcattacc 693
Query: 495 aatattttgcacccttatactgatctacagataagttgaagtgaatatcatgtttttaat 554
||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 aatattttgtactcttatactgatctacagataagttgaagtgaatatcatgtttttaat 753
Query: 555 tctatacttttacctattagtagcagacacttatattgtccatccccttagtgagaacag 614
| |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 754 tatatacttttacctattagtagcagacacttatattgcccatccacttagtgagaacag 813
Query: 615 gacatttctgaaa 627
|||||||||||||
Sbjct: 814 gacatttctgaaa 826
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 627
Length of database: 1026
Length adjustment: 10
Effective length of query: 617
Effective length of database: 1016
Effective search space: 626872
Effective search space used: 626872
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no051_b21.g1 MSMg01no051_b21.g1 CHROMAT_FILE:
MSMg01no051_b21.g1 PHD_FILE: MSMg01no051_b21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:50:20 2005
(327 letters)
>mm_chr3_78199058_78199784
Length = 727
Score = 584 bits (302), Expect = e-171
Identities = 320/326 (98%)
Strand = Plus / Minus
Query: 2 tgaatgacaacccaatttacagaactttcagttttatctttgttggggcacatatcccag 61
|||||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||
Sbjct: 527 tgaatgacaacccaatttacagaactgtcagttttatatttgttggggcacatattccag 468
Query: 62 acaagaaactgccaaaaaaggagatatctttatttcgtaaataacttagttatttggctt 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 acaagaaactgccaaaaaaggagatatctttatttcgtaaataacttagttatttggctt 408
Query: 122 tcagctatcaatcatgtccttagtttaattgaatgtagagctttcttttaatattaggac 181
|||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 407 tcagctatcaattatgtccttagtttaattgaatgaagagctttcttttaatattaggac 348
Query: 182 aaagttaaactttatatctaccgagtttggacaactcttttcagcactgacttttagtgc 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 aaagttaaactttatatctaccgagtttggacaactcttttcagcactgacttttagtgc 288
Query: 242 agcttccctcctgaacctgaagtcctgaacagtatttacaggccccaaatctgtcatcca 301
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 agcttctctcctgaacctgaagtcctgaacagtatttacaggccccaaatctgtcatcca 228
Query: 302 gtacaatcttcagaaactggtttggt 327
||||||||||||||||||||||||||
Sbjct: 227 gtacaatcttcagaaactggtttggt 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 327
Length of database: 727
Length adjustment: 9
Effective length of query: 318
Effective length of database: 718
Effective search space: 228324
Effective search space used: 228324
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
