Query= MSMg01no052_a05.b1 MSMg01no052_a05.b1 CHROMAT_FILE:
MSMg01no052_a05.b1 PHD_FILE: MSMg01no052_a05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:52:30 2005
(620 letters)
>mm_chr6_148543723_148544742
Length = 1020
Score = 429 bits (222), Expect = e-124
Identities = 255/266 (95%), Gaps = 2/266 (0%)
Strand = Plus / Minus
Query: 5 gaattcagttcccaact-ggactccagggctggtgatgtagctctgtggtggagcttgcc 63
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 gaattcagttcccaa-taggactccagggctggtgatgtagctctgtggtggagcttgcc 411
Query: 64 aagcatatactaatcttgaagtccactttatccctgaaaagaactgctgctgttgtcaga 123
|||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 410 aagcatataccaatcttgaagtccactttatccctgaaaagaactgctggtgttgtcaga 351
Query: 124 aatcaacagtgttgcacagtctgaataaaatctgtgaaacctattagactgtacacattt 183
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 350 aatcaacagtgttgcacagtctgaataaaatctttgaaacctattagactgtacacattt 291
Query: 184 gtttattctgaacagctgtagaagttactaaatacatctcttctttgccttcttgtaact 243
|||||||||||||||| |||||||||| |||| ||||||||||||| |||||||||||
Sbjct: 290 gtttattctgaacagccgtagaagttattaaacacatctcttctttttcttcttgtaacc 231
Query: 244 ctaataaaaatgaaaatgtaaaaaaa 269
||||||||||||||||||||||||||
Sbjct: 230 ctaataaaaatgaaaatgtaaaaaaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 620
Length of database: 1020
Length adjustment: 10
Effective length of query: 610
Effective length of database: 1010
Effective search space: 616100
Effective search space used: 616100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no052_a05.g1 MSMg01no052_a05.g1 CHROMAT_FILE:
MSMg01no052_a05.g1 PHD_FILE: MSMg01no052_a05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:52:30 2005
(635 letters)
>mm_chr3_57391793_57392827
Length = 1035
Score = 596 bits (308), Expect = e-174
Identities = 326/332 (98%)
Strand = Plus / Minus
Query: 1 cacagcagtaggaagaaaacagacaacttaaaggtgtcctctaattccatatgagtacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 cacagcagtaggaagaaaacagacaacttaaaggtgtcctctaattccatatgagtacaa 273
Query: 61 tggcacttagacaccatacctccaccaacacacatggggaaataataatagtattattat 120
||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 272 tggcactcagacaccatacctccaccaacacacatggggaaataataatagtagtattat 213
Query: 121 tcttgttatttgtttgtttgtttgagacagggtgtcttggctttcctggaactcaactgt 180
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 tattgttatttgtttgtttgtttgagacagggtgtcttggctttcctggaactcaactgt 153
Query: 181 gtagaccaggctgctctctaacgtacagagatctgcttacctttacttctcaaatgctag 240
||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 152 gtagaccaggctgctctctgacttacagagatctgcttacctttacttctcaaatgctag 93
Query: 241 gattaaagaggtgtaccaccatgcctggcaataataataattttaaaattgaaaaccaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92 gattaaagaggtgtaccaccatgcctggcaataataataattttaaaattgaaaaccaac 33
Query: 301 tagagggctggcaagatggctcagcgggtaag 332
|||||| |||||||||||||||||||||||||
Sbjct: 32 tagaggactggcaagatggctcagcgggtaag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 635
Length of database: 1035
Length adjustment: 10
Effective length of query: 625
Effective length of database: 1025
Effective search space: 640625
Effective search space used: 640625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
