ATCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTTTGTTCAGTTCTGAGCCCCAATTTTTAATGGGTTTAATTGATTTT
CTGGGGTCCACCTTCTTGAGTTATTTATATATATTGGATATTAGTCCCCT
ATCCGATTTAGGATAGGTAAAGATCCTTTCCCAAACTGTTGGTGGCCTTT
TTGTCTTATTGGCGGTGTCTTTTGCCGTGCAGAAGCTTTGCAATTTTATG
AGGTCCCATTTGTCAATTCTTGATCTTACAGCAGAAGCCATTGCTGTTCT
ATTCAGGAATTTTCCCCCTGTACCCATATCTTTGAGGCTTTTCCCTACTT
TCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGGAGTTCCTTAATC
CACTTAGATTTGACCTTAGTACAAGGAGATAGGAATGGATCAATTCGCAT
TCTTCTACATGATAACAGCCAATTGTGCCAGCACCATTTGTTGAAAATGC
TGTCTTTTTTTTCACTGGGGTGGTTTTTGCTCCCCTGTCAAAGATCAAGT
GACCATAGGTGGTGTGGGTTCATTTCTGGGTCTTCAATTCTATTCCAATT
GGCCTACTTGTCTGTCCGCTATACTACCACCATGAAGTTTTTTATTCCCA
ATTGGCTCCTATGTAACAGCTTTAGGTCAGGTTTTGATGATTCN

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXAGCCCTGAACACATACATACAAGTGACA
TTAAATGAACCAAACATTATAAATATAAAATAATAATTAGTGAAAAAATG
GCTATGAATTTGAAGGAGAGCAGGGAAGAATATATTTGATGAAGGAATTC
ATGTAATTATAATATCAAAACTAAAATAAAAATATTACAAAAAAATAAAA
GAAGTTCAAAAATATGAGAAATGAGACTAAAATTTTGTCAATAACTAACG
CCAACACAGGCAGAGCCAAAGCACTAATGGAAGTTACATTTTTTTTTTTT
GGCATACTCATGACTTTGAGATGTGTCCAACTTTTTCACAGTCCATCAAA
CAGAAAAGCTTTAGGGTAGTAAGGAGAGTATATGCAGAGACTGAGCTGAG
AAATACTGGGGCTGCGTAATGAGGTCATGGAGCAAATCAACACAGCTGGG
CTGCTGACTGTTCATTAGCCCACCCAAGAAGACCCAGAGGTTGTCCCAAG
CCAGAACAGTTGCCAAGCGGAAAGAAAGAATCTCTTGAAGTTCAAGATCC
TTAACCGACAATTCCAAACACTTTTAAAGTGGGAAAGCCTCCCAGGGGGC
CTGGTAACTTCAAGGGGCAAAGGCTCCGAGTTTGGCAACTATGGTTTCTG
AAG

Query= MSMg01no052_o24.g1 MSMg01no052_o24.g1 CHROMAT_FILE:
MSMg01no052_o24.g1 PHD_FILE: MSMg01no052_o24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:53:42 2005
         (374 letters)



>mm_chr3_25007449_25008222
          Length = 774

 Score =  700 bits (362), Expect = 0.0
 Identities = 373/380 (98%), Gaps = 6/380 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   agccctgaacacatacatacaagtgacattaaatgaaccaaacattataaatataaaata 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 agccctgaacacatacatacaagtgacattaaatgaaccaaacattataaatataaaata 254

                                                                       
Query: 61  ataattagtgaaaaaatggctatgaatttgaaggagagcagggaagaatatatttgatga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 ataattagtgaaaaaatggctatgaatttgaaggagagcagggaagaatatatttgatga 314

                                                                       
Query: 121 aggaattcatgtaattataatatcaaaactaaaataaaaatattacaaaaaaataaaaga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 aggaattcatgtaattataatatcaaaactaaaataaaaatattacaaaaaaataaaaga 374

                                                                       
Query: 181 agttcaaaaatatgagaaatgagactaaaattttgtcaataactaacgccaacacaggca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 agttcaaaaatatgagaaatgagactaaaattttgtcaataactaacgccaacacaggca 434

                                                                       
Query: 241 gagccaaagcactaatggaagttacatttttttttttt------ggcatactcatgactt 294
           ||||||||||||||||||||||||||||||||||||||      ||||||||||||||||
Sbjct: 435 gagccaaagcactaatggaagttacattttttttttttttttttggcatactcatgactt 494

                                                                       
Query: 295 tgagatgtgtccaactttttcacagtccatcaaacagaaaagctttagggtagtaaggag 354
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 tgagatgtgtccaactttttcacagtccatcaaacagaaaagctttagggtagtaaggag 554

                               
Query: 355 agtatatgcagagactgagc 374
            |||||||||||||||||||
Sbjct: 555 cgtatatgcagagactgagc 574


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 374
Length of database: 774
Length adjustment: 9
Effective length of query: 365
Effective length of database: 765
Effective search space:   279225
Effective search space used:   279225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)