TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCGAAGATCCGCGG
AATTCCCTTTGCTGTTCCCTCAGCCCCAAGCAGCTACTGTTCACCCCCTG
AGGTCAGCCACCACCACACCAGCAACCCAGTAGAAAGAAAACTCTAGAAG
CTTATAACTAACAAGTCAGATTTATATATCAATAAATCCTCAATTCACAA
AATGCCAATACAATAATTTCAGAACCAATAGATAATGATAAAAGCTGCCC
ACCATCTCAATTATTCTAACCTTTATGATACCGTAACTACCTGTGGCCAT
TTAAAGCCACTCTGGTTCAGGTGGTTCTTCCTGTATGTCTGTCTCCATCT
TGGCTCCTCCTTCTCTTCCAAGACTCTCTCTGTCTCTGGAACTCTTGGCT
CTGCCTCCCTTTCCCTGTCTAATCACAGGCCTCCTGCTGTACTAATATTT
TAATGCGATTGGACAGGGAAAATCCTGTCATAACCTATAACATCTGATGA
GACAGAAGCATCTATTACAAACCTCCCAACTGAAAAAAATCTCCGGGCCA
AGTGGATTTATTGAAGAGTTCTTACAGAGCTTTAATGAAGTAACTTATAC
CAATACCCCTTATACTATCGCAACATATATCAGGGTGGGTGTGTTATATA
CCCAATCTTTTCTTTCAATCCACGGATCTACCTGGATTCTGCCCCTGGGT
CTATTACTTG

CAATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTTAAAAATGGAGCAGCAGGAGTCACAA
GGCAGAAAAGGAAAATGATTACAGCACTCCATCAGTCCTGAGAACTGCTG
TCTGCAACTTCGAAAGAAATCATTGCTCTGGGGGGACTGTTTTGCACGGT
GTTAAATGTAGAATCTGTATAAATACCATTTTATATAATGCAGTATTTTT
AAGTAGGAAAACTATAGCTTTTTGCAGCAACATACCAAAGCACCATCCTT
CCTAAATTCTTCAGAAATCTTGAGAATCTTCTATAGTCAGAGAAGCAGGT
AACCCAACTACTGATCTTCACCTCTGTCTCCTCTCCCCCAAATATGATCC
CCCTGTTTCACTCCTAACTCTGTAGCAGATGACTGTCTGTGGCTTCCTCC
TCCTCCCTGTTCCCCATCTCCTGAGGACAACAAAAATCTTCTCCAACTTC
CTCACCACTCATCTTATTTTTCCAGCCACCAACTACAGCAGGAACTCCCT
GGAAAACACCAGAAAAGTGTGCCAAAGAGATAGGTATGTCCACTAAGCAA
GAAAGGTCCTTGAATAGGAAATGAATTATAAGCCCATTAAAGAAATCTGT
TGAAATCCTTTACCCTAACACATATACATACCCACTCTCATACTTTCCTA
TTT

Query= MSMg01no053_e21.g1 MSMg01no053_e21.g1 CHROMAT_FILE:
MSMg01no053_e21.g1 PHD_FILE: MSMg01no053_e21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:54:11 2005
         (478 letters)



>mm_chr3_42293619_42294497
          Length = 879

 Score =  857 bits (443), Expect = 0.0
 Identities = 458/463 (98%), Gaps = 1/463 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttaaaaatggagcagcaggagtcacaaggcagaaaaggaaaatgattacagcactccatc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 463 ttaaaaatggagcagcaggagtcacaaggcagaaaaggaaaatgattacagcagttcatc 404

                                                                       
Query: 61  agtcctgagaactgctgtctgcaacttcgaaag-aaatcattgctctggggggactgttt 119
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 403 agtcctgagaactgctgtctgcaacttcgaaagaaaatcattgctctggggggactgttt 344

                                                                       
Query: 120 tgcacggtgttaaatgtagaatctgtataaataccattttatataatgcagtatttttaa 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 tgcacggtgttaaatgtagaatctgtataaataccattttatataatgcagtatttttaa 284

                                                                       
Query: 180 gtaggaaaactatagctttttgcagcaacataccaaagcaccatccttcctaaattcttc 239
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 283 gtaggaaaactatagctttttgtagcaacataccaaagcaccatccttcctaaattcttc 224

                                                                       
Query: 240 agaaatcttgagaatcttctatagtcagagaagcaggtaacccaactactgatcttcacc 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 agaaatcttgagaatcttctatagtcagagaagcaggtaacccaactactgatcttcacc 164

                                                                       
Query: 300 tctgtctcctctcccccaaatatgatccccctgtttcactcctaactctgtagcagatga 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 tctgtctcctctcccccaaatatgatccccctgtttcactcctaactctgtagcagatga 104

                                                                       
Query: 360 ctgtctgtggcttcctcctcctccctgttccccatctcctgaggacaacaaaaatcttct 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 ctgtctgtggcttcctcctcctccctgttccccatctcctgaggacaacaaaaatcttct 44

                                                      
Query: 420 ccaacttcctcaccactcatcttatttttccagccaccaacta 462
           ||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 43  ccaacttcctcaccactcatcctatttttccagccaccaacta 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 478
Length of database: 879
Length adjustment: 10
Effective length of query: 468
Effective length of database: 869
Effective search space:   406692
Effective search space used:   406692
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)