Query= MSMg01no053_h15.b1 MSMg01no053_h15.b1 CHROMAT_FILE:
MSMg01no053_h15.b1 PHD_FILE: MSMg01no053_h15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:54:24 2005
(285 letters)
>mm_chr15_77062540_77063222
Length = 683
Score = 489 bits (253), Expect = e-143
Identities = 272/279 (97%), Gaps = 4/279 (1%)
Strand = Plus / Plus
Query: 8 gaattcaatgta-ttcacttaatagcctagttctcttctgggcacctggattttcattca 66
|||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 208 gaattcaatgtagtt-acttaatagcctagttctcttctgggcacttggattttcattca 266
Query: 67 tactaaagaaaagaggaatgttcattgatggagcttcatggaaaaagaataaaatttcca 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 tactaaagaaaagaggaatgttcattgatggagcttcatggaaaaagaataaaatttcca 326
Query: 127 cttaatggcagccacatcaaagatataattacattcaaaagcatggtcatgtattcacac 186
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 cttaatggcagccacatcaaagatataattacattcaaaagcatggtcatgtattcaca- 385
Query: 187 agagtcaaagtttataatccctccaaaataatgagaagtagggtcaatttaagcttatac 246
||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 386 -gagtcaaagtttatactccctccaaaacaatgagaagtagggtcaatttaagcttatac 444
Query: 247 aggaccattgtctcttgtccatcataccccattccctcc 285
|||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aggaccattgtctcttgtccatcataccccattccctcc 483
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 683
Length adjustment: 9
Effective length of query: 276
Effective length of database: 674
Effective search space: 186024
Effective search space used: 186024
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no053_h15.g1 MSMg01no053_h15.g1 CHROMAT_FILE:
MSMg01no053_h15.g1 PHD_FILE: MSMg01no053_h15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:54:24 2005
(179 letters)
>mm_chr3_122849085_122849663
Length = 579
Score = 323 bits (167), Expect = 4e-93
Identities = 176/179 (98%)
Strand = Plus / Minus
Query: 1 attcattcatttttcgtttgaattattctttttctaattttaatggtgtgcctgataatt 60
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 attcatttgtttttcgtttgaattattctttttctaattttaatggtgtgcctgataatt 320
Query: 61 gaagtaaagactgttctgctatgttctgatggtgaattatacccaattaacaaatggaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 gaagtaaagactgttctgctatgttctgatggtgaattatacccaattaacaaatggaac 260
Query: 121 ccctgggcctacaatgatggaagtgtcggttgattccacgccttccttgtcattagccc 179
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 259 ccctgggcctacaatgatggaagtgtcgggtgattccacgccttccttgtcattagccc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 179
Length of database: 579
Length adjustment: 8
Effective length of query: 171
Effective length of database: 571
Effective search space: 97641
Effective search space used: 97641
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
