Query= MSMg01no053_i11.b1 MSMg01no053_i11.b1 CHROMAT_FILE:
MSMg01no053_i11.b1 PHD_FILE: MSMg01no053_i11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:54:28 2005
(323 letters)
>mm_chr3_158821446_158822170
Length = 725
Score = 557 bits (288), Expect = e-163
Identities = 312/322 (96%), Gaps = 6/322 (1%)
Strand = Plus / Minus
Query: 6 gaattcattcat---atacaatagatttgtattatttatagcatcaattatttttacaac 62
|||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 gaattcattcataaaat--aatagatttgtattatttatagcatcaattatttttacaac 468
Query: 63 aacaagtgataggcaatggtgaaggagggcttcactggtaatttaac-tttgaaaggaat 121
|| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 467 aataagtgataggcaatggtgaaggagggcttcactggtaatttaacttttgaaaggaat 408
Query: 122 gaagaaaattgttctaagtttaaagactactgagcaataaatctgtagttaattaataca 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 407 gaagaaaattgttctaagtttaaagactactgagcaataaatctgtagttaattaatgca 348
Query: 182 aatgtttgtagcatggttgccttggtcaatataggaaaaggtagataaggtgctgctggg 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 aatgtttgtagcatggttgccttggtcaatataggaaaaggtagataaggtgctgctggg 288
Query: 242 ctacctgggtgagactctggttacttccggttcccattgcaagcttgcaaaccatgggta 301
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 287 ctacctgggtgagactctggttacttccggttcccagtgcaagcttgcaaaccatgggta 228
Query: 302 gaggttgtagggtttgtttgtt 323
|||| |||||||||||||||||
Sbjct: 227 gaggatgtagggtttgtttgtt 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 725
Length adjustment: 9
Effective length of query: 314
Effective length of database: 716
Effective search space: 224824
Effective search space used: 224824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no053_i11.g1 MSMg01no053_i11.g1 CHROMAT_FILE:
MSMg01no053_i11.g1 PHD_FILE: MSMg01no053_i11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:54:28 2005
(406 letters)
>mm_chr1_131357503_131358308
Length = 806
Score = 762 bits (394), Expect = 0.0
Identities = 403/406 (99%)
Strand = Plus / Minus
Query: 1 attctgaacacagtttcaacacatcctcaaatcagattttaggccttgggttctgcagta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 attctgaacacagtttcaacacatcctcaaatcagattttaggccttgggttctgcagta 547
Query: 61 attaaatcattctctgaaagttggctcacctgtttgaaaatcaatcaagggcaaagaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 attaaatcattctctgaaagttggctcacctgtttgaaaatcaatcaagggcaaagaaat 487
Query: 121 cagtctaacaaagatgaataagaggtggtcatagcttctttcaatgcttcactagtttta 180
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 486 cagtctaacaaagatgaataagaggcggtcatagcttctttcaatgcttcactagtttta 427
Query: 181 atactgaatacaaaatgcttttcaaaaaatactctttgaaaggtatacaggattgtaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 atactgaatacaaaatgcttttcaaaaaatactctttgaaaggtatacaggattgtaaaa 367
Query: 241 atctagctgataacacagtcttcctttctctactgttaaaggaaaaaaaaaagctctcga 300
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 atctagctgagaacacagtcttcctttctctactgttaaaggaaaaaaaaaagctctcga 307
Query: 301 ggggaatctctccttgtgaaagtttactctagtggaaatgtctccaaaatattaaaagaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 ggggaatctctccttgtgaaagtttactctagtggaaatgtctccaaaatattaaaagaa 247
Query: 361 agtcacttcccaatattgccatattatttaaaactgtaacctaaac 406
||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 246 agtcacttcccaatatttccatattatttaaaactgtaacctaaac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 406
Length of database: 806
Length adjustment: 9
Effective length of query: 397
Effective length of database: 797
Effective search space: 316409
Effective search space used: 316409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
