ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCAGCTCTCTTCCTGGACATCCTTGTTTTTCCAGCCACCTAAGTGGTAC
TGAGTTCCATGTACTGAGTTGTGAAAAGGATTGGCTTTCTACTGATCAAG
TCTGCAATTTCTTTGCAATGGGAAGTATCCTTCCTCCTCAGTACTTTCAA
AATGGCAACACTTATTATGAAAATAGATAGGTAGAAATGTATTTTTTTTC
TAGATGGAAATATATTATAGTTTCTCTGAAATTGCATCCATTAATCAAAT
TAAATCTATTTATGAGAAAAATGTAGCTTCTAAATGGACAAATGATTTAT
TCAAGGTCAGATTTAAATCAATCAGAGTCATGAGTGGCTCACTCTCCCAG
AATTTTTATGTGTTCTCTTATATAGTGTCTTAATTGTAAAGAATTTCTTG
CAGCAGAGTAAAAATTTTCCAGATGAGAAATATAATTGAACCGAATATAT
GTATAAATCTGGGGTTATCAAACCTCCAGGTTCTAAATGTGGGCTTTACC
ACGAAAATAATTATTTTATTGTGTATTCTAATACTTCAGGATTCCATTAA
GCATTTTAAACGATCACTTGTTTTGAATTGGGAAGAAAAAGAAAATTAGG
TCTAATGAAGTTACGTGGGAAATAAATGCACTATGACTATGTAGACATTC
TTTCAN

CCGGGGGTCCCCCCCCNCCCCCCCNNCCNCCCCCCCCCCCCCNCCCCNNN
CCCCCCCCCCNNCCCCCCCCCCCCNNCCCCCNNNCCAATAAANCCNTAAC
CCTNNCNNCCCCTGCNCTTTCCAAATTTAACTGAAATTATGGGGGGGTTC
NCNNTCAATCTTTTTNNAANANACANAACATAACCAATGACAATGTGACC
CNCACTNNAANNTCANTATTTGTGGAGGGGGGACCAACAACNNCCNNNNN
NAATCCCTTCTTGACAAATTGGGGGGTGGGGTGGATGAGGGGGGAAGANG
GGGNCCAACCNCNNTTTAACCTCCTCCATNTCAATCCCAAAAAAAAACCT
TTTTTTAATAAATACTTTCCCAAAAAATTTACTTTGGTAGTGGGGGGGGG
GGGGGGGGGGGGGGGTAAANNCNAAAAACAAAAAATTTTCTTTNTTATTT
TTCTTTTATTATTTTTTTGTTTGGGGGGGGGGANNNNNNTATTTTTTCTT
AAACNATTTTCTCTTCTTTCTTCCCCTTTTACCCCAATATTCCCCTATTA
TTTTTATATTTCTATTTTCCCCTATATCACCTTTTTTACACTTCTTTTCT
TCACAAATTTTTTCCTTCCCCCCTTTAAAACCCTCCCTAAAAAAAAAAAT
AATAACNTTTTTTTTTTTTTTTTTTTTTTCAACACACATCTCCCCTCTTT
TTTTTTTCCTTTTTTTTTCCTATCTATATTTTCTTACATACATTAACAAA
CAACACCACCCATTTTTTTAAATTCACTATTTATTTTATTACTTATTTTA
GATTGAGGGGATTGTCCCTTTNTTCTTTTTTTTCTATTTTTTCATTTTTT
TAATTTTGTAGTGTGATGGAGCTATTGTNTCCCNTGGGGN

Query= MSMg01no055_c01.b1 MSMg01no055_c01.b1 CHROMAT_FILE:
MSMg01no055_c01.b1 PHD_FILE: MSMg01no055_c01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:56:28 2005
         (507 letters)



>mm_chr3_119394325_119395231
          Length = 907

 Score =  913 bits (472), Expect = 0.0
 Identities = 496/504 (98%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcagctctcttcctggacatccttgtttttccagccacctaagtggtactgagtt 63
           |||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcagctctcataatggacatccttgtttttccagccacctaagtggtactgagtt 263

                                                                       
Query: 64  ccatgtactgagttgtgaaaaggattggctttctactgatcaagtctgcaatttctttgc 123
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 264 ccatgtactgagttgtgaaaaggattgtctttctactgatcaagtctgcaatttctttgc 323

                                                                       
Query: 124 aatgggaagtatccttcctcctcagtactttcaaaatggcaacacttattatgaaaatag 183
           ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct: 324 aatgggaagtatccttcctcctcagcactttcaaaatggcaacacttcttatgaaaatag 383

                                                                       
Query: 184 ataggtagaaatgtattttttttctagatggaaatatattatagtttctctgaaattgca 243
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ataggtggaaatgtattttttttctagatggaaatatattatagtttctctgaaattgca 443

                                                                       
Query: 244 tccattaatcaaattaaatctatttatgagaaaaatgtagcttctaaatggacaaatgat 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tccattaatcaaattaaatctatttatgagaaaaatgtagcttctaaatggacaaatgat 503

                                                                       
Query: 304 ttattcaaggtcagatttaaatcaatcagagtcatgagtggctcactctcccagaatttt 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ttattcaaggtcagatttaaatcaatcagagtcatgagtggctcactctcccagaatttt 563

                                                                       
Query: 364 tatgtgttctcttatatagtgtcttaattgtaaagaatttcttgcagcagagtaaaaatt 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tatgtgttctcttatatagtgtcttaattgtaaagaatttcttgcagcagagtaaaaatt 623

                                                                       
Query: 424 ttccagatgagaaatataattgaaccgaatatatgtataaatctggggttatcaaacctc 483
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ttccagatgaaaaatataattgaaccgaatatatgtataaatctggggttatcaaacctc 683

                                   
Query: 484 caggttctaaatgtgggctttacc 507
           ||||||||||||||||||||||||
Sbjct: 684 caggttctaaatgtgggctttacc 707


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 507
Length of database: 907
Length adjustment: 10
Effective length of query: 497
Effective length of database: 897
Effective search space:   445809
Effective search space used:   445809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)