Query= MSMg01no058_a04.b1 MSMg01no058_a04.b1 CHROMAT_FILE:
MSMg01no058_a04.b1 PHD_FILE: MSMg01no058_a04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:00:09 2005
(465 letters)
>mm_chr3_126548515_126549379
Length = 865
Score = 891 bits (461), Expect = 0.0
Identities = 464/465 (99%)
Strand = Plus / Minus
Query: 1 aaattttagctacttaaaattgacatttttgaaattttccccaaaatgtaccacttaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 615 aaattttagctacttaaaattgacatttttgaaattttccccaaaatgtaccagttaact 556
Query: 61 ccatctccttttgtattttcagggccatggctacctccctttgtggctctcatcttcttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 ccatctccttttgtattttcagggccatggctacctccctttgtggctctcatcttcttg 496
Query: 121 ctgaggcactggaatgcaagtacatcctttgcaataacagtaagcttaacttaagagagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 ctgaggcactggaatgcaagtacatcctttgcaataacagtaagcttaacttaagagagc 436
Query: 181 tccccatggtaaagcaagggttgcacaccctcctgatctgaaacagggaatgatagcaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 tccccatggtaaagcaagggttgcacaccctcctgatctgaaacagggaatgatagcaag 376
Query: 241 agggttctgtgagtatcatgggttcatttatacattttgttgaggtggggtcttctatgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 agggttctgtgagtatcatgggttcatttatacattttgttgaggtggggtcttctatgt 316
Query: 301 agcccatactagcttgctgagatcatagccatataccagcatgcccaataacgctcattt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 agcccatactagcttgctgagatcatagccatataccagcatgcccaataacgctcattt 256
Query: 361 aatatacaaaaaaggtattctagggattttatgcctgttatttctaatccttaagatatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 aatatacaaaaaaggtattctagggattttatgcctgttatttctaatccttaagatatt 196
Query: 421 ataatttaatttatatacttacactcattttaaggaaactgaagt 465
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 ataatttaatttatatacttacactcattttaaggaaactgaagt 151
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 465
Length of database: 865
Length adjustment: 10
Effective length of query: 455
Effective length of database: 855
Effective search space: 389025
Effective search space used: 389025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no058_a04.g1 MSMg01no058_a04.g1 CHROMAT_FILE:
MSMg01no058_a04.g1 PHD_FILE: MSMg01no058_a04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:00:09 2005
(290 letters)
>mm_chr3_126442034_126442724
Length = 691
Score = 524 bits (271), Expect = e-153
Identities = 285/293 (97%), Gaps = 7/293 (2%)
Strand = Plus / Plus
Query: 1 taaattaataaggtagtattatttaggactttcactgagccttgaaacccca----acgt 56
|||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 201 taaattaataaggtagtattatttaggactttcactgagccttgaaac---ataaaacgt 257
Query: 57 tcagaaagtgaggaatggaaccagaccaggaaatgacaggtgaatgtgttcaaattgtgt 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 tcagaaagtgaggaatggaaccagaccaggaaatgacaggtgaatgtgttcaaattgtgt 317
Query: 117 gttcgaggtaaagtacatgtatgaaagtgccacaatgaaatctattcttttatatagtta 176
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 gtttgaggtaaagtacatgtatgaaagtgccacaatgaaatctattcttttatatagtta 377
Query: 177 ataaaagctaattaaatagtgctctcaatagacttataaaggaaaatcataagttttctt 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 ataaaagctaattaaatagtgctctcaatagacttataaaggaaaatcataagttttctt 437
Query: 237 ctgttccattattgtgtgtggtcatgtaaaatttatgtgatgtagatttattg 289
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 ctgttccattattgtgtgtggtcatgtaaaatttatgtgatgtagatttattg 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 691
Length adjustment: 9
Effective length of query: 281
Effective length of database: 682
Effective search space: 191642
Effective search space used: 191642
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
