GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTCACC
TGATCCCTGCAGAATGGCAGGGAAGCACCTGAAAAAATGTGCAACATCCT
TAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGATTCCATCTCATA
CCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGCAAATCAAATCT
ACGTGATAACCAAGATTTGCCATTATATGAAGTTTAGGATTGTTTTAGAA
ACCCATTAAGAGTATAGATTTCTATAAAATTATTTCTATATTTATTAATA
CATACGATTCCCATTAAAAGTAAATTTTTTTTCTCAGGTATTTATTTCAT
TTACATTTCCAATGCTATCCCAACAGTCCCCCACAACCTCCCCCACCTAC
TACTCCACCCACCCACTCCCACTTCTTGGCCCTGGCATTCCCCTATACTG
AGTCATATAAAGTTTGCATGACCAATGGGCCTCTCTTTCCACTGATGGCC
CACTAGGTCATCTTCTGATACATATGCAGCTAGAAACACGAGCTCCAGGG
GGTACTGGTTAGTTCATATTTTTGTTTCACATATAGGGTTGCAGATCACC
CCAGCTCTCTGGGTACTTTCAATAGCTCCTCCATTGGGGGCCCTGTGATC
CATCCAATAGCTGACTGTGAGCATCCACTTCTGTGTTTGCTAGGCCTCAG
CATAGTCTCACAAGAGACAGCTATATCT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXCAGGATAGCCAGGGCTATAGAGAGAAGGCCTGTCT
TGAAAAAAAATACACACACACACACACACACACACACACACACACACACA
CACACACACACACACACATATCTTTATATCCTTTGTGGCCTTTTCTGGAA
TATCTCTTCTCTTTTTAATGTTTTCATCAAGAATACAGAATAATTTCTTG
ATTAGCTAATACTCCGTATATACTTTAAAAGTCATATATTTTTGTTTAAT
ATCCATGAAACATTTTATAAATGTCAAAATGTTGAGGTGGCCTAACAGGT
TTTGTTGAAGTCAATAATTTTCTTAAAGAATTATGCTATACTTATGAGTT
GTAGAGAAAGAAATGATGAAGTCGGTAACTCTTACCATAAGGTGGTCTGT
TCATTTTAGTATAATATCTTTTGTCTCCTATATTATGAGCTTTAGTCATT
AGATACAATCATACAATATGAAATCAGCCAGAGAATATTTTCTAAATAAC
TTCTCACTCTTCAATTCCTCATAAGATGGTGTCTGATATTCAATTGAAGT
AATTGCTTTAGTTTTTGTTTGCTTTTTTTTTTTGTCACAAATTTTGGTGA
CTTCTGTGGCTTATTACTTCTTAAATACTTAAATGTCATTCCATATTTCA
AAACAGTCACATGGAACACTGCTTTACAATGGTTT

Query= MSMg01no061_c20.g1 MSMg01no061_c20.g1 CHROMAT_FILE:
MSMg01no061_c20.g1 PHD_FILE: MSMg01no061_c20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:04:05 2005
         (572 letters)



>mm_chr3_73986715_73987686
          Length = 972

 Score =  775 bits (401), Expect = 0.0
 Identities = 464/499 (92%), Gaps = 25/499 (5%)
 Strand = Plus / Plus

                                                                       
Query: 89  acacacacacacac------atatctttatatcctttgtggcct---------------t 127
           ||||||||||||||      |||||||||||||| |||||||||               |
Sbjct: 268 acacacacacacacgtatatatatctttatatcccttgtggcctgagaatgtactttgtt 327

                                                                       
Query: 128 ttctggaatatctcttctctttttaatgttttcatcaagaatacagaataatttcttgat 187
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 328 ttctggaatatctcttctctttttaatgttttcatcaagaatacagaataatttctagat 387

                                                                       
Query: 188 tagctaatactccgtatatactttaaaagtcatatatttttgtttaatatccatgaaaca 247
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 388 tagctaatactccgtatatactttaaaagacatatatttttgtttaatatccatgaaaca 447

                                                                       
Query: 248 ttttataaatgtcaaaatgttgaggtggcctaacaggttttgttgaagtcaataattttc 307
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 448 ttttataaatgtcaaaatgttgaggttgcctaacaggttttgttgaagtcaataattttc 507

                                                                       
Query: 308 ttaaagaattatgc--tatacttatgagttgtagagaaagaaatgatgaagtcggtaact 365
           ||||||||||||||  |||  |||||||||||||||| ||||||||||||||| ||||||
Sbjct: 508 ttaaagaattatgccgtat--ttatgagttgtagagatagaaatgatgaagtccgtaact 565

                                                                       
Query: 366 cttaccataaggtggtctgttcattttagtataatatcttttgtctcctatattatgagc 425
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 cttaccataaggtggtctgttcattttagtataatatcttttgtctcctatattatgagc 625

                                                                       
Query: 426 tttagtcattagatacaatcatacaatatgaaatcagccagagaatattttctaaataac 485
           |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 626 tttagttattagatacaatcatacaatatgaaatcagccacagaatattttctaaataac 685

                                                                       
Query: 486 ttctcactcttcaattcctcataagatggtgtctgatattcaattgaagtaattgcttta 545
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 ttctcactcttcaatgcctcataagatggtgtctgatattcaattgaagtaattgcttta 745

                              
Query: 546 gtttttgtttgcttttttt 564
            ||||||||||||||||||
Sbjct: 746 atttttgtttgcttttttt 764


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 47
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 972
Length adjustment: 10
Effective length of query: 562
Effective length of database: 962
Effective search space:   540644
Effective search space used:   540644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)