Query= MSMg01no063_i12.b1 MSMg01no063_i12.b1 CHROMAT_FILE:
MSMg01no063_i12.b1 PHD_FILE: MSMg01no063_i12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:07:55 2005
(325 letters)
>mm_chr3_129047820_129048544
Length = 725
Score = 561 bits (290), Expect = e-164
Identities = 314/322 (97%), Gaps = 2/322 (0%)
Strand = Plus / Plus
Query: 5 gaattcctcaattg-ttcctgagacactttgcatatggagtgtgcatcatcgataatgaa 63
|||||||||||||| || ||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 205 gaattcctcaattgctt-ctgagacactttgcatatggagtgtgcatcatcaacaatgaa 263
Query: 64 atttactattttgtgcttttctttagcatctgaaactctgtagtgtggattctgaaagag 123
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 264 atttactattttgtgcttttctttagcatctgaagctctgtagtgtggattctgaaagag 323
Query: 124 caatggtacaaattgactcatttgtttatggttaagttcattacatggagacagctgaat 183
||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 caatggtacaatttgattcatttgtttatggttaagttcattacatggagacagctgaat 383
Query: 184 ttgataatcaaaggctaaattacctttgaaggccaatgtggttttgatttttcgatagcc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttgataatcaaaggctaaattacctttgaaggccaatgtggttttgatttttcgatagcc 443
Query: 244 ccatagtatggatttttctttctcccttctgcagctaagcagttcttataatctttgctg 303
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 444 ccatagtatggatttttctttctcccttctgcagctaagcagttcttatcatctttgctg 503
Query: 304 taaaaactcttgactccattgt 325
||||||||||||||||||||||
Sbjct: 504 taaaaactcttgactccattgt 525
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 325
Length of database: 725
Length adjustment: 9
Effective length of query: 316
Effective length of database: 716
Effective search space: 226256
Effective search space used: 226256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no063_i12.g1 MSMg01no063_i12.g1 CHROMAT_FILE:
MSMg01no063_i12.g1 PHD_FILE: MSMg01no063_i12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:07:55 2005
(530 letters)
>mm_chr3_129180961_129181890
Length = 930
Score = 982 bits (508), Expect = 0.0
Identities = 514/516 (99%)
Strand = Plus / Minus
Query: 15 tacaatttcctgattgttccatgatccagcagactaatttgctatgtattaaaatgtata 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 930 tacaatttcctgattgttccatgatccagcagactaatttgctatgtattaaaatgtata 871
Query: 75 ttccatagcaagctagttaccgtggcatgcctttaatcccaggtcttgggaggcaaaggt 134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 870 ttccatagcaagctagttaccgtggcatgcctttaatcccaggtcttgggaggcaaaggt 811
Query: 135 aggtggatctctatgagtttggaaccaacctgttttacttgagttccaggccagttaggg 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 810 aggtggatctctatgagtttggaaccaacctgttttacttgagttccaggccagttaggg 751
Query: 195 ctacatagtgagatcttatccacagaataggttcaaatctggcctcagctggccttggct 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 ctacatagtgagatcttatccacagaataggttcaaatctggcctcagctggccttggct 691
Query: 255 ttgaaccaagaaactttagaatgaaaaggaatcctcatatatcacatatgtcatgatgaa 314
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 690 ttgaaccaagaaactttagaatgaaaaggagccctcatatatcacatatgtcatgatgaa 631
Query: 315 agctacctgaagtatcattactagtaattaatttcctttatgagaaactgctcttcttgt 374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 agctacctgaagtatcattactagtaattaatttcctttatgagaaactgctcttcttgt 571
Query: 375 gtaatactgcaatatggaaccaggtagaatgcgtggataaccttagccagatttttcaga 434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 gtaatactgcaatatggaaccaggtagaatgcgtggataaccttagccagatttttcaga 511
Query: 435 tgctagtagctgatcagtttaggtaagactggctttggaccttgtaatcaatatggaatt 494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 tgctagtagctgatcagtttaggtaagactggctttggaccttgtaatcaatatggaatt 451
Query: 495 gtatctgtttgaaccgaaagcagaaccatcctgcta 530
||||||||||||||||||||||||||||||||||||
Sbjct: 450 gtatctgtttgaaccgaaagcagaaccatcctgcta 415
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 530
Length of database: 930
Length adjustment: 10
Effective length of query: 520
Effective length of database: 920
Effective search space: 478400
Effective search space used: 478400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
