Query= MSMg01no066_k16.b1 MSMg01no066_k16.b1 CHROMAT_FILE:
MSMg01no066_k16.b1 PHD_FILE: MSMg01no066_k16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:12:32 2005
(386 letters)
>mm_chr3_17959687_17960471
Length = 785
Score = 708 bits (366), Expect = 0.0
Identities = 378/382 (98%), Gaps = 1/382 (0%)
Strand = Plus / Plus
Query: 5 ggaattcttgctgtaatcgctcccattgccttttcttagcccacgatccactagagaaaa 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ggaattcttgctgtaattgctcccattgccttttcttagcccacgatccactagagaaaa 264
Query: 65 cccaggctcacagatttccttccccatgcacttttctcatgcaacaccagaaacaaactt 124
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 265 cccaggctcacagatttccttccccatgcacttttcgcatgcaacaccagaaacaaactt 324
Query: 125 ttgtacctgccttgcagacctaacctaacatgagtggcagtgactgttgcaatgtaatga 184
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 325 ttgtacctgccttgcagacctaacccaacatgagtggcagtgactgttgcaatgtaatga 384
Query: 185 cttatgaaagatataatcatgggttaaattgaatcctccgtttaactgttaatggtgtgc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cttatgaaagatataatcatgggttaaattgaatcctccgtttaactgttaatggtgtgc 444
Query: 245 tctgggcacatttatgtattaaatgctatggtaactaattaccattaggaaaaaaaaaaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tctgggcacatttatgtattaaatgctatggtaactaattaccattaggaaaaaaaaaaa 504
Query: 305 agataatgcccttcccagactttgaaaaataatgataagttcagttccgggcatgcagcg 364
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 -gataatgcccttcccagactttgaaaaataatgataagttcagttccgggcatgcagcg 563
Query: 365 ctttgtggtggctctgcctggc 386
||||||||||||||||||||||
Sbjct: 564 ctttgtggtggctctgcctggc 585
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 386
Length of database: 785
Length adjustment: 9
Effective length of query: 377
Effective length of database: 776
Effective search space: 292552
Effective search space used: 292552
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no066_k16.g1 MSMg01no066_k16.g1 CHROMAT_FILE:
MSMg01no066_k16.g1 PHD_FILE: MSMg01no066_k16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:12:32 2005
(332 letters)
>mm_chr3_18060562_18061295
Length = 734
Score = 588 bits (304), Expect = e-172
Identities = 328/338 (97%), Gaps = 7/338 (2%)
Strand = Plus / Minus
Query: 1 agcttttttgacagctatcagcaccactgactagtggtttagggtgtcttagcgagagag 60
||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 508 agcttctttgacagctatcagcaccactgactagtggtttagggtgtcttagcgagcgag 449
Query: 61 ggaaagagtagggaagaattccattagttcagggttttccccctgctgctggagcaaagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 ggaaagagtagggaagaattccattagttcagggttttccccctgctgctggagcaaagc 389
Query: 121 ttctgccagcagccattgaaatcaacaccatgctcctgtgcccttctgacacaaatcacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 ttctgccagcagccattgaaatcaacaccatgctcctgtgcccttctgacacaaatcacc 329
Query: 181 ccaacatctgg-tcccactgtatgcttctttccgggtcctc--tggacagtgcttgctgt 237
||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 328 ccaacatctggctcc-actgtatgcttctttccgggtcctcgctggacagtgcttgctgt 270
Query: 238 gaatgctttctcgaactctttttgatttgtatgaaaacaaaaggaagcttgttttacccc 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 gaatgctttctcgaactctttttgatttgtatgaaaacaaaaggaagcttgttttacccc 210
Query: 298 atgttttggatttttttta---aaatattatttcaaaa 332
|||||||||||||||||| ||||||||||||||||
Sbjct: 209 atgttttggattttttttttttaaatattatttcaaaa 172
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 332
Length of database: 734
Length adjustment: 9
Effective length of query: 323
Effective length of database: 725
Effective search space: 234175
Effective search space used: 234175
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
