Query= MSMg01no068_h08.b1 MSMg01no068_h08.b1 CHROMAT_FILE:
MSMg01no068_h08.b1 PHD_FILE: MSMg01no068_h08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:14:54 2005
(176 letters)
>mm_chr3_108708026_108708599
Length = 574
Score = 310 bits (160), Expect = 4e-89
Identities = 172/176 (97%), Gaps = 2/176 (1%)
Strand = Plus / Plus
Query: 1 gcctccaccagctttgacatctaggtcctatgaaacataagagataccctactggttaaa 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 gcctccaccagctttgacatctaggtcctatgaaacataagagataccctaccggttaaa 260
Query: 61 aaaaaaaaagacacatcaacatatacatgaacactttaaaaaattattttataccatctt 120
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 261 aaaaaaaaagacacatcaacatatacatgaacactttaaaaaaa-attttataccatctt 319
Query: 121 gtggaatcaactataaaaaaactaacagaaaaatttcaatttgtgtatcctaatct 176
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 -tggaatcaactataaaaaaactaacagaaaaatttcaatttgtgtatcctaatct 374
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 176
Length of database: 574
Length adjustment: 8
Effective length of query: 168
Effective length of database: 566
Effective search space: 95088
Effective search space used: 95088
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no068_h08.g1 MSMg01no068_h08.g1 CHROMAT_FILE:
MSMg01no068_h08.g1 PHD_FILE: MSMg01no068_h08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:14:54 2005
(235 letters)
>mm_chr3_108859857_108860491
Length = 635
Score = 358 bits (185), Expect = e-103
Identities = 224/241 (92%), Gaps = 9/241 (3%)
Strand = Plus / Minus
Query: 1 gtaatgggccatgtggcaagcgtggactagtgtagatgaggttaactaagttataccagc 60
|||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||
Sbjct: 376 gtaacgggccatgtggcaagtgtggactagtgtagatgaggttaattaagttataccagc 317
Query: 61 tagtcaggaagtagcctaagctaaagcctgagccataata---aataataataagtctct 117
|||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||
Sbjct: 316 tagtcaggaagtagcctaagataaagcctgagccataataaataataataa---gtctct 260
Query: 118 gtgtctttgttgggagctggcagattaagatagactataatagacaaatgatagcagatg 177
||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||
Sbjct: 259 atgtctttgttgggagctggcagattaagacagacaataatagacaaatgatagcagatg 200
Query: 178 atagatagatagatagatagttagatagatagatagatagatagatagatag---ataga 234
|||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||
Sbjct: 199 atagatagatagatagatagatagatagatagatagatagatagatagatagttaataga 140
Query: 235 t 235
|
Sbjct: 139 t 139
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 61
Number of extensions: 23
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9
Number of HSP's successfully gapped: 1
Length of query: 235
Length of database: 635
Length adjustment: 9
Effective length of query: 226
Effective length of database: 626
Effective search space: 141476
Effective search space used: 141476
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
