Query= MSMg01no072_h13.b1 MSMg01no072_h13.b1 CHROMAT_FILE:
MSMg01no072_h13.b1 PHD_FILE: MSMg01no072_h13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:20:14 2005
(550 letters)
>mm_chr3_49868151_49869101
Length = 951
Score = 1042 bits (539), Expect = 0.0
Identities = 545/547 (99%), Gaps = 1/547 (0%)
Strand = Plus / Minus
Query: 5 gaattcactgcttcagccatggccatatatacagtttgtgtgtctttcaacctgcatatg 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 gaattcactgcttcagcaatggccatatatacagtttgtgtgtctttcaacctgcatatg 517
Query: 65 aaatgagtagagccaccagagttgtttgcacaaatggtttagtgcccatgcttatcctat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 aaatgagtagagccaccagagttgtttgcacaaatggtttagtgcccatgcttatcctat 457
Query: 125 caatagaatttctggtgagattactacaaagttgccggctctcagtgtggaagggagaaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 caatagaatttctggtgagattactacaaagttgccggctctcagtgtggaagggagaaa 397
Query: 185 ggacttagctggtgcgaaatgtgctgacattcttgcctctccattagtgaaagactccag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 ggacttagctggtgcgaaatgtgctgacattcttgcctctccattagtgaaagactccag 337
Query: 245 atggactcctcgggaggagccctttccctttaccatgtgctccatctctctgccctgctc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 atggactcctcgggaggagccctttccctttaccatgtgctccatctctctgccctgctc 277
Query: 305 acttctcatataatttga-ttttttttttggtattttattatattagaaagcaatggaaa 363
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 acttctcatataatttgatttttttttttggtattttattatattagaaagcaatggaaa 217
Query: 364 gagagaagacttgtaaaagtgtttgctggcaagacctaagttcagacccaatagctggca 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 gagagaagacttgtaaaagtgtttgctggcaagacctaagttcagacccaatagctggca 157
Query: 424 tggtggaaggtgaaaactatttcttgtaagttgtcttcacaagtaaataaatatgttgtg 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 tggtggaaggtgaaaactatttcttgtaagttgtcttcacaagtaaataaatatgttgtg 97
Query: 484 gtatgtacacacacacacttcacaagtaaaacatatgttgtggcatgtgtacacgcacac 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 gtatgtacacacacacacttcacaagtaaaacatatgttgtggcatgtgtacacgcacac 37
Query: 544 acacaat 550
|||||||
Sbjct: 36 acacaat 30
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 550
Length of database: 951
Length adjustment: 10
Effective length of query: 540
Effective length of database: 941
Effective search space: 508140
Effective search space used: 508140
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no072_h13.g1 MSMg01no072_h13.g1 CHROMAT_FILE:
MSMg01no072_h13.g1 PHD_FILE: MSMg01no072_h13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:20:14 2005
(542 letters)
>mm_chr3_49753879_49754820
Length = 942
Score = 1040 bits (538), Expect = 0.0
Identities = 541/542 (99%)
Strand = Plus / Plus
Query: 1 acatgagatcgtaagcattctgataaccagaatacaactagttgattaaattccatcagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acatgagatcgtaagcattctgataaccagaatacaactagttgattaaattccatcagt 260
Query: 61 gttaattcacagcttgtcacatagccttaatgagaaatagattgccaattacagactttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gttaattcacagcttgtcacatagccttaatgagaaatagattgccaattacagactttt 320
Query: 121 tctcaatagataactaaatgattaatcacataactaataggatcatatactttcctataa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctcaatagataactaaatgattaatcacataactaataggatcatatactttcctataa 380
Query: 181 agtggtaacatacaaacactttatttaaaaatactttgctatatcatgatatatcatgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtggtaacatacaaacactttatttaaaaatactttgctatatcatgatatatcatgat 440
Query: 241 catattgacatgttgacataggattatttatataacctatgtactaaaattcagtatccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 catattgacatgttgacataggattatttatataacctatgtactaaaattcagtatccc 500
Query: 301 aatatatcaagataaaatatgataattatgaattttcaaacagtaaagtagaggcaatga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aatatatcaagataaaatatgataattatgaattttcaaacagtaaagtagaggcaatga 560
Query: 361 tagaaagaagtgggtttatgttaattttagcagtaaatatgccattcaatatgtatatca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tagaaagaagtgggtttatgttaattttagcagtaaatatgccattcaatatgtatatca 620
Query: 421 gggaataccaataaatttcaccctaccaggaagtcttaactgtcaactaatgtaaattgc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gggaataccaataaatttcaccctaccaggaagtcttaactgtcaactaatgtaaattgc 680
Query: 481 acgtgttaaaatcatgtcatctaatctaaaatgacgatgaatacatttattaaaaaaaca 540
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 681 acgtgttaaaatcatgtcatctaatctaaaatgatgatgaatacatttattaaaaaaaca 740
Query: 541 aa 542
||
Sbjct: 741 aa 742
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 542
Length of database: 942
Length adjustment: 10
Effective length of query: 532
Effective length of database: 932
Effective search space: 495824
Effective search space used: 495824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
