XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTG
CTTCCAGTCTCTATATAAACATCTTTAAAGCTTGTTGTAGACAAATATTT
GCTCATATATGTATCTACCTGTATATCATGAGCCCTCCAACCCCTGCTCT
CAGTTCCTGAATATCTTTCCAGACTTTTGAGGCTTTAGAAGTGTGGTCTT
AGAATCATTAAATTTTTGACCACTTATCCATTATTATTTAGTTATCCGAG
TCAATCTATAACATGAAATTTAATTTAGCTAAAGACAATCTTCATTCTAA
ATTAGAATATACATGACCCCTGGTAACAGCCTGTCCATCTTTTCTTTCTT
TCTTTTCCCAAATGCAAACAAAGTCTTATATCTATAGACTCTTTGAATAC
ATAACTATACAAAACATTTATTACAGAATAGATTTTTCCTAGCAATTCAA
ATTCTTTTTTATTTTAATTAGGTATTTTCTTCATTTACATTTCCAATGCT
ATCCCAAAAGTCCCCCATACCCTCCCCCCCCACTCCCCCATCCACCCACT
CCCACTTCTTGGCCCTGGCATTCCCCTGCACTGAGGCATATAAAGTTTGC
AAGACCAATAACATTCCATTTCTACTTTGAATATAATAAGCATCCTCTAA
ATTGGTATTTCCAGTAGTATGATATATTTTATTCAACAATATAAAAATTC
TTCCTTGAAATACTCCATTTTAGAGGA

ATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXTGTGGGTTTTGTTTTTGTTTTTGTTTTTGT
TTTTTGTTTTTGTTTTTGTCAGCAGTAAGGACTTATCATCAATTTGTGGA
GAGCAACCAATACGCTCGCCAACAGCCTGGGGTTGACTGGAATTTTCATG
GGGACCCTTTGACCAACATCATAATTTGATGTAACTCATCCCTGTCTATA
TCTTGTTCAGGTGTTGTCTCTCCTTTGGTGATATCAATTGATATTTCTAT
CATATATGTATTATTTTCTGAGGCTTCTAATACTGTCCTAAGTTTCCATA
CTACTATTGTAAGTTTCCCCACGAATGACCTTTTGTTTTAGTTGTCCATT
CCCACATTCCCTCACTTCTTCCCTCTAGCTCCCAATTTGATCCTTCCCTG
TCCAGTGGCCTCCCACTACCCATCTGTAAATATCTCATCTATTTCCCTTT
CTTGGGGAGATGCTTCCTTCTACCATAGACCTTAATCTAAACTGAACCTC
TAGGATTACATAGATAAGAGTGTGTATTGACATCTATAACAGCTAGCATC
TACATACCATGAAAATCTTGCCATATTTGTCATTTGAGATCTGGGTTACC
TTATTCTGGATAATTTTTTTCCTCCCTTCAATTTAACTGCCAATTTCATA
GGTTATCTTTTTAACAGCCTGATTATCTT

Query= MSMg01no072_j14.b1 MSMg01no072_j14.b1 CHROMAT_FILE:
MSMg01no072_j14.b1 PHD_FILE: MSMg01no072_j14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:20:23 2005
         (534 letters)



>mm_chr3_76329001_76329935
          Length = 935

 Score =  992 bits (513), Expect = 0.0
 Identities = 528/533 (99%), Gaps = 2/533 (0%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattctgcttcc-agtctctatataaacatctttaaagcttgttgtagacaaatattt 62
           |||||| ||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 ggaattatgcttccaagtatctatataaacatctttaaagcttgttgtagacaaatattt 555

                                                                       
Query: 63  gctcatatatgtatctacctgtatatcatgagccctccaacccctgctctcagttcctga 122
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 gctcatatatgtatctacctgtatatcatgagccctccaacccctgctctcagttcctga 495

                                                                       
Query: 123 atatctttccagacttttgaggctttagaagtgtggtcttagaatcattaaatttttgac 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 atatctttccagacttttgaggctttagaagtgtggtcttagaatcattaaatttttgac 435

                                                                       
Query: 183 cacttatccattattatttagttatccgagtcaatctataacatgaaatttaatttagct 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 cacttatccattattatttagttatccgagtcaatctataacatgaaatttaatttagct 375

                                                                       
Query: 243 aaagacaatcttcattctaaattagaatatacatgacccctggtaacagcctgtccatct 302
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 374 aaagacaatcttcattctaaattagaatatacatgacccctggtaaaagcctgtccatct 315

                                                                       
Query: 303 tttctttctttcttttcccaaatgcaaacaaagtcttatatctatagactctttgaatac 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 tttctttctttcttttcccaaatgcaaacaaagtcttatatctatagactctttgaatac 255

                                                                       
Query: 363 ataactatacaaaacatttattacagaatagatttttcctagcaattcaaattctttttt 422
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 ataactatacaaaacatttattacagaatagatttttcctagcaattcaaattctttttt 195

                                                                       
Query: 423 attttaattaggtattttcttcatttacatttccaatgctatcccaaaagtcccccatac 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 attttaattaggtattttcttcatttacatttccaatgctatcccaaaagtcccccatac 135

                                                                
Query: 483 cct-ccccccccactcccccatccacccactcccacttcttggccctggcatt 534
           ||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 cctcccccccccactcccccatccacccactcccacttcttggccctggcatt 82


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 534
Length of database: 935
Length adjustment: 10
Effective length of query: 524
Effective length of database: 925
Effective search space:   484700
Effective search space used:   484700
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)