CCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCAGAGCATCC
GCGGAATTCACTAATATAGCCACAATTCTTTGCCATAAAGCACCTTACCA
AATCAAGAGACTCAAGACATGTAAACTTGATGTAGAGTCATAACAGAATA
AAATGTGTTTCTAAAAAATTCAGAATATCATTTTGCTTGAAAATATTTTT
TAAGAACTGAGTAATATTCTGTTGTATAAATGTTCATTTGAGAGACATCT
AGGTTCTTTCTGATTATTATGAATAAAGTCACAAGAAACATAGCTGAGTG
AGTGGCCTTGTGGTAGCATTGAATATCCTTTGTGCATATGCTAACAAAGT
GCTATATTTAGATCTTTAGCTACACTGGATATTTAATGGTTATATAGATT
TGTGTTACCTCACTGTTCTATACTACTAGAGCAATGATGAGATCCTGCAA
CCATAGAATGTTTTAATGTCAATATAGTAAAATAAAAATGACCTTTATTC
AAAAATAAGTCCATTAAATGGCTTTAAATTTTGATAGCTAAAGATTATGT
ATAAATTGAACTCTGTATTTTTCATAGCTTACAACTAGAAAATATGTCAT
ATCACCACATATTATCCCTATAACAGATAGAAATTATTTAACGCTACCCT
AAGACTTACTTGAAGACATCAAATTTACAAACGACTACCA

NCCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXTCAGTTCAGCTTTGTACTCCATT
TTTTAAAATGGGGATTGTGGTTTTCTGGAGTACAAATTCTTGAGATTTTT
GTATATTTTTGTATATTAGCCATCCATGAGATGTAGGGTTAGTGAAGTTT
TTTGCAACCTGTGGGTTGCTGATTTTTCCTACTGATTGTATCTTTTGCTG
TACAGAAGCTTTTCAGTTTCATGAGGGCCCACTTATCAGTTCTTGAATTT
AGAACCTGAGCCATTGGAATTCTGTTTAGAAAATCTCCTCCTGTGCCAAC
GAGTTAGAGGTTCTTTCTCACTCTCTTCTATTTGATTCACTCTATCTGGT
ATTATGTTGATGCCCTTGATTCAACTGAACTTGAGTTTAGTGCAGAGTAA
TAAATATGGATCTATTTTCATTCTTTTACTGCCAGTTAGACCAGCACTAT
TTCTTGAAGATGCTTTCTTTTCTTTTTTTTTTTTTCCATTTTATGGTTTT
GGTTTCTTTTTAAAAATATCTCTATGCTCTTTTATTTATTTGTTGGAACT
TCTCTATTCAGATACCTAGCCCCATTTTAATTGGGCCATTTATCTTCTTG
GATGTCTTTTTTAGTCCTTTATACTTTCCACT

Query= MSMg01no075_e02.b1 MSMg01no075_e02.b1 CHROMAT_FILE:
MSMg01no075_e02.b1 PHD_FILE: MSMg01no075_e02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:23:52 2005
         (349 letters)



>mm_chr3_111850812_111851560
          Length = 749

 Score =  659 bits (341), Expect = 0.0
 Identities = 347/349 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   attctttgccataaagcaccttaccaaatcaagagactcaagacatgtaaacttgatgta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attctttgccataaagcaccttaccaaatcaagagactcaagacatgtaaacttgatgta 260

                                                                       
Query: 61  gagtcataacagaataaaatgtgtttctaaaaaattcagaatatcattttgcttgaaaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagtcataacagaataaaatgtgtttctaaaaaattcagaatatcattttgcttgaaaat 320

                                                                       
Query: 121 attttttaagaactgagtaatattctgttgtataaatgttcatttgagagacatctaggt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attttttaagaactgagtaatattctgttgtataaatgttcatttgagagacatctaggt 380

                                                                       
Query: 181 tctttctgattattatgaataaagtcacaagaaacatagctgagtgagtggccttgtggt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctttctgattattatgaataaagtcacaagaaacatagctgagtgagtggccttgtggt 440

                                                                       
Query: 241 agcattgaatatcctttgtgcatatgctaacaaagtgctatatttagatctttagctaca 300
           ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 441 agcattgaagatcctttgtgcatatgctaacaaagtgctatatttagatctttagctaga 500

                                                            
Query: 301 ctggatatttaatggttatatagatttgtgttacctcactgttctatac 349
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctggatatttaatggttatatagatttgtgttacctcactgttctatac 549


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 349
Length of database: 749
Length adjustment: 9
Effective length of query: 340
Effective length of database: 740
Effective search space:   251600
Effective search space used:   251600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)