Query= MSMg01no078_e14.b1 MSMg01no078_e14.b1 CHROMAT_FILE:
MSMg01no078_e14.b1 PHD_FILE: MSMg01no078_e14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:26:34 2005
(275 letters)
>mm_chr3_59901279_59901953
Length = 675
Score = 501 bits (259), Expect = e-146
Identities = 268/271 (98%)
Strand = Plus / Plus
Query: 5 gaattcacaatcccgcagaacagcagctaggactatcatcataactatgctatccaggct 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 205 gaattcacaatcccggagaacagcagctaggactatcatcataactatgctatccagact 264
Query: 65 aagtacagtgttaatgagtaacttcaataaaattttctatcagcatttaagcaaaatgtg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aagtacagtgttaatgagtaacttcaataaaattttctatcagcatttaagcaaaatgtg 324
Query: 125 ctatgaagggctagtgatatggcttagtggttaagatcatgtgttgctcttacagagaac 184
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ctatgaagggctagtggtatggcttagtggttaagatcatgtgttgctcttacagagaac 384
Query: 185 tttggtccccagcatctgtcaggacacttgcaactgcctgtaattccagctccactggat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tttggtccccagcatctgtcaggacacttgcaactgcctgtaattccagctccactggat 444
Query: 245 cctatgcctctgaccttctttgagacacaca 275
|||||||||||||||||||||||||||||||
Sbjct: 445 cctatgcctctgaccttctttgagacacaca 475
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 275
Length of database: 675
Length adjustment: 9
Effective length of query: 266
Effective length of database: 666
Effective search space: 177156
Effective search space used: 177156
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no078_e14.g1 MSMg01no078_e14.g1 CHROMAT_FILE:
MSMg01no078_e14.g1 PHD_FILE: MSMg01no078_e14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:26:34 2005
(532 letters)
>mm_chr3_60071440_60072372
Length = 933
Score = 986 bits (510), Expect = 0.0
Identities = 528/534 (98%), Gaps = 3/534 (0%)
Strand = Plus / Minus
Query: 1 ttttctgc-catagaatgaacatactagggtagaacccctttttaagatatcccattgag 59
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 ttttctgcacatagaatgaacatactagggtagaacccctttttaagatatcccattgag 674
Query: 60 agtcattgcctcagattatttcagtagaacagagagaacaataaaga-ctttttttttct 118
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 673 agtcattgcctcagattatttcagtagaacagagagaacaataaagatttttttttttct 614
Query: 119 gaatggctgtaggtggggatttttaaacatggagaccactgaactataggggaaagaagt 178
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 gaatggctgaaggtggggatttttaaacatggagaccactgaactataggggaaagaagt 554
Query: 179 catcaggatgagaaaaggcataagcagaccaatgagagaggcaggatccaggctgagact 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 catcaggatgagaaaaggcataagcagaccaatgagagaggcaggatccaggctgagact 494
Query: 239 gaaaggatattttctcacctccagttggactttggtttctttcactaaccattccccacc 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 gaaaggatattttctcacctccagttggactttggtttctttcactaaccattccccacc 434
Query: 299 ctttaggattgctgacacattccagtaatatctccagcaaataaccttttctccctttct 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 ctttaggattgctgacacattccagtaatatctccagcaaataaccttttctccctttct 374
Query: 359 tttattttgcttaaactagctagagtccttttgttgtggagttaaaattgctctaaatta 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 tttattttgcttaaactagctagagtccttttgttgtggagttaaaattgctctaaatta 314
Query: 419 tacctgaattgagacattcactctgcaaaaaaatattcagaaatcaatgacaaaaagtga 478
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 313 tacctgaattgagacattcactctgcaaaaaaa-attcagaaatcaatgacaaaaagtga 255
Query: 479 acattgattgaggttttgtcaactaaggtttggcagctgaaggtcaaggagtag 532
||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 254 acattgattgaggttttttcaactaaggtttggcagctgaaggtcaaggagtag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 532
Length of database: 933
Length adjustment: 10
Effective length of query: 522
Effective length of database: 923
Effective search space: 481806
Effective search space used: 481806
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
