XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTCA
CCTGAGGACTACCGAATGGCAGAGAAGCACTTGAAAAAATGTTCAACATC
CTTAATCATCAGGGTAATTTTTCACTCTTTAGTCCTGTTCCTTCTATGCC
TATATACTTTAAAGCTCCAAGGCATATACCTCAGATTTTGGAGAAGGTGG
GAAATTAGTTCACAATTAATTCTTAGTGTTTTTTTTTTCTTTTATGACAC
AGTTGGGTAAAAGGGGAAAAGTAGACAACTAAAATTCTCTAAAATCATAT
AAAGATTTATTTTAAAATCTAGGTTAGATGATAATTATATTCTAACTATA
GAAGATATAATACATAAAAACTGAATGACATGCAGAAATGAAGAATCATA
AACAAGACTCATAACATTTACTATGGATCAGTTATGACATCTTACAATAT
GTACTTCTTTCTAACATAGTGATTAGAGAGCTTGGTATCACAAATGTTCA
ATTTTTTTTTGTACTCTCCTGGTCATGTCATATCTAATTTGAATCTTTTC
AGCAATAGCATAATTTCTGTGGGAATGTTTGTATACAAGGTAAAGAACAA
CATGTGGTACTGAGAAGAAAAAAATATAAGCTCTTTAACTCTTAGATTCT
ATAAGATGTAAAAAAAAGAAAATGGGACAAAAGACATTGATGGTCTGAAA
TCAAGTCAGA

GTGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAGAGAAGCACCT
GAAAAAATGCTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAA
CCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCA
GGTGACAGCAGATGCTGGCGTGGATGTGGAGAAAGAGGAACACTCCTCCA
TTGTTGGTGGGATTGCAGGCTTGTACAACCACTCTGGAAATCAGTCTGGC
AGTTCCTCAGAAAACTGGATATAGTACTACCGGAGGATCCAGCAATACCT
CTCCTGGGCATATATCCAGAAGATGCCCCAACTGGTAAGAAGGACACATG
CTCCACTATGTTCATAGCAGCCTTTTTTATAATAGCCAGAAGCTGGAAGG
AACCCAGATGCCCCTCAACAGAGGAATGGTTACAGAAAATGTGGTACATC
TACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATT
CCTAGGCAAATGGAGGGACCTGGAGGGCATCATCCTGAGTGAGGTAACAC
ATTCACAAAGGAACTCACACAATATGTACTCACTGATAAGTGGATATTAG
CCCAAAACCTAAGATACCCAAGATATAAGATACAATTTCCTAAACACATG
ACACTCA

Query= MSMg01no080_b22.b1 MSMg01no080_b22.b1 CHROMAT_FILE:
MSMg01no080_b22.b1 PHD_FILE: MSMg01no080_b22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:55 2005
         (673 letters)



>mm_chr3_72043995_72045068
          Length = 1074

 Score = 1073 bits (555), Expect = 0.0
 Identities = 586/597 (98%), Gaps = 3/597 (0%)
 Strand = Plus / Minus

                                                                       
Query: 78  taatttttcactctttagtcctgttccttctatgcctatatactttaaagctccaaggca 137
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 877 taatttttcactctttagtcctgttccttctatgcctatatactttaaagctccaaggca 818

                                                                       
Query: 138 tatacctcagattttggagaaggtgggaaattagttcacaattaattcttagtgtttttt 197
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 817 tatacctcagattttggagaaggtggaaaattagttcacaattaattcttagtgtttttt 758

                                                                       
Query: 198 ttttcttttatgacacagttgggtaaaaggggaaaagtagacaactaaaattctctaaaa 257
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 ttttcttttatgacacagttgggtaaaaggggaaaagtagacaactaaaattctctaaaa 698

                                                                       
Query: 258 tcatataaagatttattttaaaatctaggttagatgataattatattctaactatagaag 317
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 tcatataaagatttattttaaaatctaggttagatgataattatattctaactatagaag 638

                                                                       
Query: 318 atataatacataaaaactgaatgacatgcagaaatgaagaatcataaacaagactcataa 377
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 637 atataatacataaaaactgaatgacatgtagaaatgaagaatcataaacaagactcataa 578

                                                                       
Query: 378 catttactatggatcagttatgacatcttacaatatgtacttctttctaacatagtgatt 437
           ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 577 catttactatgcatcagttatgacatcttaaaatatgtacttctttctaacatagtgatt 518

                                                                       
Query: 438 agagagcttggtatcacaaatgttcaatttttttttgtactctcctggtcatgtcatatc 497
           ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||
Sbjct: 517 agagagcttggtatcacaaatgttcaa-ttttttttgtactctcctggtcatatcatatc 459

                                                                       
Query: 498 taatttgaatcttttcagcaatagcataatttctgtgggaatgtttgtatacaaggtaaa 557
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 caatttgaatcttttcagcaatagcataatttctgtgggaatgtttgtatacaaggtaaa 399

                                                                       
Query: 558 gaacaacatgtggtactgagaagaaaaaaatataagctctttaactcttagattctataa 617
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 398 gaacaacatgtggtactgagaagaaaaaaatataagatctttaactcttagattctataa 339

                                                                    
Query: 618 gatgt--aaaaaaaagaaaatgggacaaaagacattgatggtctgaaatcaagtcag 672
           |||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 338 gatgtaaaaaaaaaagaaaatgggacaaaagacattgatggtttgaaatcaagtcag 282


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 673
Length of database: 1074
Length adjustment: 10
Effective length of query: 663
Effective length of database: 1064
Effective search space:   705432
Effective search space used:   705432
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)