XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAGAAT
CTCTGGCAGAGCAGTCAGTGCTCTTAACTGCTGAGCCATCTCTCCAGCCC
AAATAGTGAACTTTTATCAACACTTATATTTACTTACTAGCCAATTCCAT
GTTCTCAGCCATTTTATACAATATGCTACTATTTATGAAGGTGTGTGTGT
GTGTGCATGCGTCTAAAAATGATGCAAGGTGCTACCCTTTATTTATCTCC
CCTTTATTAGTTAAGGCAGTGTCTCCCCAGACCCAGAACCTGCCAATTCT
GGCCAGTCTAAGTAAGGAGATTGTTCCAGGGAGTCCCTGCCTCTGCCTCC
TGAGTGCTGAGATTTCAAGCGGCTGCCCAACCTGCTTGGCTTTTTTGAGG
GTTCTGCCCACCCAAGTTCTTGTCTTCATACTCAAGTGGTAAGCAGTTTA
TACATGGATCCAGTTCTGTATCCCATTGATGAATTTTTACAGAGGACCAC
AACAGATGCATGGGTACGAATGTTCACATTTCTCAATGTCACTTGTCATT
ACTTTCAATATCTCTTACCCCGTTTATTGAATATGGCTTCCAATTTCCTG
GCTTACCCCTTGTTTACCACATTTTCTTCGTTTCCCTCCACCCATTGCCC
CACCCCTTATTTTTTTCCCCCCATTCCTTTTCCTCCCTTTTCCCTTTTTT
TTTTTTTTCCCCCCCCCCTTTA

TGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXATCTCTTTTGTCTGGCAGGTCAAAAAAATTCCAGTCA
TTTATCGAGAGCTGCTTGGTAAAGAATCACAGCCAGCGGCCAGCCACGGA
GCAGTTGATGAAGCACCCATTCATACGAGACCAACCTAATGAGAGGCAGG
TCCGCATCCAGCTGAAGGACCACATTGATCGAACAAAGAAGAAGCGAGGA
GAAAAAGGTTAGTTGCCCGTTTGTATTTCAGAGCAAGAAACAAAAGGCAG
TTCACTGTGGGCTCTTGGTATATTTGGAGGTGACTGGAGAGTTCCTCATA
GGCTGCATTATTCTTTCCTGTGAAATCTGCCTGTTAGGTCAGAGCCGGGG
GAATGGCCGAAAAGAAATTACCACCGAAGGCAAATCTCCTTGGAAAAATT
CGACCTGTGAGCCATATTTCTTTTAGGCACCAAACAAAGCCATGCTGGGT
GATACTATGAAGCACTGTAGACGACAAGTGACTTCAAATGAATATTCATG
TTCCAAAGAGTGACATCTACACATGTCAGCCAACCTAAAGACATCATCTG
ATTGGCATCCCCTGTATTGATTGCCATCTCCTGCATTGACGCTCTATGCT
CCTAGACTTGATCCTGTCGCCTACAAGTCATAACAGACCCTCCTATTGCC
GCCTGATATGCT

Query= MSMg01no080_g18.g1 MSMg01no080_g18.g1 CHROMAT_FILE:
MSMg01no080_g18.g1 PHD_FILE: MSMg01no080_g18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:29:19 2005
         (527 letters)



>mm_chr3_28462779_28463705
          Length = 927

 Score =  932 bits (482), Expect = 0.0
 Identities = 512/528 (96%), Gaps = 12/528 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   atctcttttgtctggcaggtcaaaaaaattccagtcatttatcgagagctgcttggtaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atctcttttgtctggcaggtcaaaaaaattccagtcatttatcgagagctgcttggtaaa 260

                                                                       
Query: 61  gaatcacagccagcggccagccacggagcagttgatgaagcacccattcatacgagacca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaatcacagccagcggccagccacggagcagttgatgaagcacccattcatacgagacca 320

                                                                       
Query: 121 acctaatgagaggcaggtccgcatccagctgaaggaccacattgatcgaacaaagaagaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acctaatgagaggcaggtccgcatccagctgaaggaccacattgatcgaacaaagaagaa 380

                                                                       
Query: 181 gcgaggagaaaaaggttagttgcccgtttgtatttcagagcaagaaacaaaaggcagttc 240
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 381 gcgaggagaaaaaggttagttgcctgtttgtatttcagagcaagaaacaaaaggcagttc 440

                                                                       
Query: 241 actgtgggctcttggtatatttggaggtgactggagagttcctcataggctgcattattc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 actgtgggctcttggtatatttggaggtgactggagagttcctcataggctgcattattc 500

                                                                       
Query: 301 tttcctgtgaaatctgcctgttaggtcagagccgggggaatg-gccgaaaagaaattacc 359
           |||| ||||||||||||||||||||||||||||||||||||| |  ||||||||||||||
Sbjct: 501 tttcgtgtgaaatctgcctgttaggtcagagccgggggaatgagt-gaaaagaaattacc 559

                                                                       
Query: 360 accgaaggcaaatctccttggaaaaattcgacctgtgagccatatttcttttaggcacca 419
           |          |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 a----------atctccttggaaaaattcgacctgtgagccatatttcttttaggcacca 609

                                                                       
Query: 420 aacaaagccatgctgggtgatactatgaagcactgtagacgacaagtgacttcaaatgaa 479
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 aacaaagccatgatgggtgatactatgaagcactgtagacgacaagtgacttcaaatgaa 669

                                                           
Query: 480 tattcatgttccaaagagtgacatctacacatgtcagccaacctaaag 527
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 tattcatgttccaaagagtgacatctacacatgtcagccaacctaaag 717


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 527
Length of database: 927
Length adjustment: 10
Effective length of query: 517
Effective length of database: 917
Effective search space:   474089
Effective search space used:   474089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)