Query= MSMg01no081_c07.b1 MSMg01no081_c07.b1 CHROMAT_FILE:
MSMg01no081_c07.b1 PHD_FILE: MSMg01no081_c07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:30:15 2005
(643 letters)
>mm_chr3_138734193_138735237
Length = 1045
Score = 1187 bits (614), Expect = 0.0
Identities = 635/642 (98%), Gaps = 2/642 (0%)
Strand = Plus / Plus
Query: 4 ggaattctttaag-accaatcctgtataaataaatgcaccaagcaaattccattcctctg 62
||||||||||||| | |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 204 ggaattctttaagtaacaatcctgtataaataaatgtaccaagcaaattccattcctctg 263
Query: 63 cagtatgaatacagtccctatctcagccctagtagagctagcaaactgacccaaacactt 122
|||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 264 cagtctgaatacagtccctatctcagccctagtatagctagcaaactgacccaaacactt 323
Query: 123 aagctgctttgttaagaa-gaaactgccatttgaaaactaaagaaaaacaccatgcagag 181
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aagctgctttgttaagaaagaaactgccatttgaaaactaaagaaaaacaccatgcagag 383
Query: 182 acagaacgaatataagccatctgagatactgggcacatttcaaacctgaatttcaaatat 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 acagaacgaatataagccatctgagatactgggcacatttcaaacctgaatttcaaatat 443
Query: 242 cgtaaaatttataatcaaaacagactttggtttagatgattttgctctctctaaaactaa 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 cgtaaaatttataatcaaaacagactttggtttagatgattttgctctctctaaaactaa 503
Query: 302 tgttaaaccagaatctccaatagaagataccacaggggtttaaaaacaaacaaactatac 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tgttaaaccagaatctccaatagaagataccacaggggtttaaaaacaaacaaactatac 563
Query: 362 tatgctacaacatagacataagagaagggaatgtcgaagaagtgtgagggactactgtga 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tatgctacaacatagacataagagaagggaatgtcgaagaagtgtgagggactactgtga 623
Query: 422 aattaccattatggtcaggtaagagaacagcaaccttctgccccatgaatacatttaatg 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 aattaccattatggtcaggtaagagaacagcaaccttctgccccatgaatacatttaatg 683
Query: 482 gttgactccctcaacaagtgcaaacttcagcccggcatttcagacctaccactatttggt 541
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 684 gttgactccctcaacaagtgcaaacttcagcccagcatttcagacctaccactatttggt 743
Query: 542 gactggtaatacgttttcacttctgtctcccaacgtttctgtatttttctctagctaaac 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gactggtaatacgttttcacttctgtctcccaacgtttctgtatttttctctagctaaac 803
Query: 602 aaggccttttataaacttttctagaaacatctctaaccttcc 643
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 aaggccttttataaacttttctagaaacatctctaaccttcc 845
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 643
Length of database: 1045
Length adjustment: 10
Effective length of query: 633
Effective length of database: 1035
Effective search space: 655155
Effective search space used: 655155
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no081_c07.g1 MSMg01no081_c07.g1 CHROMAT_FILE:
MSMg01no081_c07.g1 PHD_FILE: MSMg01no081_c07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:30:15 2005
(616 letters)
>mm_chr3_138834970_138835985
Length = 1016
Score = 775 bits (401), Expect = 0.0
Identities = 404/405 (99%)
Strand = Plus / Minus
Query: 212 atatggttggatgggactaggtattcatgttaattttcatgagctagttgagagtctgtc 271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1016 atatggttggatgggactaggtattcatgttaattttcatgagctagttgagagtctgtc 957
Query: 272 cagctaaagcccaacttttgaaatattaaaaagtccttgtgtagttatttgggaaactag 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 956 cagctaaagcccaacttttgaaatattaaaaagtccttgtgtagttatttgggaaactag 897
Query: 332 ctggttaaggaataactgccaccatattaatttccagcataaattaatatatagagaata 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 896 ctggttaaggaataactgccaccatattaatttccagcataaattaatatatagagaata 837
Query: 392 ttaatttaaatcattttacaacccagagttttgactcaactctaacgctgtgcttgactc 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 836 ttaatttaaatcattttacaacccagagttttgactcaactctaacgctgtgcttgactc 777
Query: 452 tacagcagtgccttcagctgacttaattgtgttagtgtcccaaagattttctttgcatgg 511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 tacagcagtgccttcagctgacttaattgtgttagtgtcccaaagattttctttgcatgg 717
Query: 512 ctatcagagttctccttccctgtaagtttggcctctttaaaattccttgaactctatgtg 571
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 ctatcagaattctccttccctgtaagtttggcctctttaaaattccttgaactctatgtg 657
Query: 572 gcctcgttaaccctccattttataacctacatatatttgacatgt 616
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 gcctcgttaaccctccattttataacctacatatatttgacatgt 612
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1016
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1006
Effective search space: 609636
Effective search space used: 609636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
