Query= MSMg01no082_f05.b1 MSMg01no082_f05.b1 CHROMAT_FILE:
MSMg01no082_f05.b1 PHD_FILE: MSMg01no082_f05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:31:46 2005
(411 letters)
>mm_chr3_152140267_152141077
Length = 811
Score = 729 bits (377), Expect = 0.0
Identities = 397/409 (97%), Gaps = 9/409 (2%)
Strand = Plus / Plus
Query: 1 cagaataaaacagtagccacgcacacctgactttcttggaggtttggtgtcagtcttagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 cagaataaaacagtagccacgcacacctgactttcttggaggtttggtgtcagtcttagt 269
Query: 61 gtaacaaatatggtcaatgcccccacttgcctagacttggagagttgcaggcaaggtgta 120
|||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct: 270 gtaacaaatatggtca---------cttgcctagacttggagagttgcaggcaaggtata 320
Query: 121 cagtatgtaccatagggcctggcccaagcaggtcaccgtctggcagctgcagtagtgggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagtatgtaccatagggcctggcccaagcaggtcaccgtctggcagctgcagtagtgggt 380
Query: 181 agttactggttcctgtgacagctggtagccctgagccactaaggagggcacaaagtcggg 240
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agttactggttcttgtgacagctggtagccctgagccactaaggagggcacaaagtcggg 440
Query: 241 gatggcacagtgttatgtagggtggcaagcattctggatcctgtcctcgcagcatctctc 300
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gatggcacagtgttatggagggtggcaagcattctggatcctgtcctcgcagcatctctc 500
Query: 301 ccctcttctgtgcctatgtaactctattccctgcccaggggccactgcccttctctctca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccctcttctgtgcctatgtaactctattccctgcccaggggccactgcccttctctctca 560
Query: 361 ggctgtgtggctctggtggtgtgccgcctgccccctactggctcctgta 409
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggctgtgtggctctggtggtgtgccgcctgccccctactggctcctgta 609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 411
Length of database: 811
Length adjustment: 9
Effective length of query: 402
Effective length of database: 802
Effective search space: 322404
Effective search space used: 322404
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no082_f05.g1 MSMg01no082_f05.g1 CHROMAT_FILE:
MSMg01no082_f05.g1 PHD_FILE: MSMg01no082_f05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:31:46 2005
(249 letters)
>mm_chr3_152262854_152263502
Length = 649
Score = 474 bits (245), Expect = e-138
Identities = 248/249 (99%)
Strand = Plus / Minus
Query: 1 attgcctgccggtggatcccattcccctagctggactgcttatctgacctcagtgggaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 attgcctgccggtggatcccattcccctagctggactgcttatctgacctcagtgggaga 532
Query: 61 ggattcacctagtcctggagtgacttgatgtgacaaggtgggtagatactcaggggggcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 ggattcacctagtcctggagtgacttgatgtgacaaggtgggtagatactcaggggggcc 472
Query: 121 tccccctcctcagaggagaaggttacatgtgagcatgtgagtatgtgtgtgcacactcat 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 471 tccccctcctcagaggagaaggttacatgtgagcatgtgagtatgtgtgtgcacacacat 412
Query: 181 atggacacacacaaagtggggataagtgaagaggaagaaaaaaaatacaactaaatagcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 atggacacacacaaagtggggataagtgaagaggaagaaaaaaaatacaactaaatagcc 352
Query: 241 aaggaagga 249
|||||||||
Sbjct: 351 aaggaagga 343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
