Query= MSMg01no082_g16.b1 MSMg01no082_g16.b1 CHROMAT_FILE:
MSMg01no082_g16.b1 PHD_FILE: MSMg01no082_g16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:31:52 2005
(510 letters)
>mm_chr3_132142904_132143815
Length = 912
Score = 700 bits (362), Expect = 0.0
Identities = 395/408 (96%), Gaps = 7/408 (1%)
Strand = Plus / Minus
Query: 109 atggaactagaaaatatcatcctgtgtgaggtaactcacacctaaaaggacatgcatagc 168
||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 912 atggaactagaaaatatcatcctgtgtgaggtaactcacacctaaaaggacatgcgtggt 853
Query: 169 ttgcactcataagtgaatat-tagcc---aaaaaaaaaagtacagaatacccaagataca 224
||| |||||||||||||| | ||||| |||||||||||||||||||||||||||||||
Sbjct: 852 ttgtactcataagtgaat-tctagccaaaaaaaaaaaaagtacagaatacccaagataca 794
Query: 225 gtccacagaactcaaagcagtcaacaagttgaggtgcccaagtgaggactcctcaatccc 284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 gtccacagaactcaaagcagtcaacaagttgaggtgcccaagtgaggactcctcaatccc 734
Query: 285 acttgggagggagaagaaagctaagactgtgcacagaagacctagtctatgttggatgca 344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 acttgggagggagaagaaagctaagactgtgcacagaagacctagtctatgttggatgca 674
Query: 345 aattcaaatactgtttagtgtgtttctgttttccctttgtaaaagaaaactgtattacaa 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 aattcaaatactgtttagtgtgtttctgttttccctttgtaaaagaaaactgtattacaa 614
Query: 405 gcttaattcaacatcttcaggatatttaaaaaaaataaaagcatgcataaactatggttt 464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 gcttaattcaacatcttcaggatatttaaaaaaaataaaagcatgcataaactatggttt 554
Query: 465 ctattgactgtaattctcatttt--tttctttttttgagaattttata 510
||||||||| || |||||||||| |||||||||||||||||||||||
Sbjct: 553 ctattgactatatttctcattttcttttctttttttgagaattttata 506
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 510
Length of database: 912
Length adjustment: 10
Effective length of query: 500
Effective length of database: 902
Effective search space: 451000
Effective search space used: 451000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no082_g16.g1 MSMg01no082_g16.g1 CHROMAT_FILE:
MSMg01no082_g16.g1 PHD_FILE: MSMg01no082_g16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:31:52 2005
(592 letters)
>mm_chr3_131994179_131995170
Length = 992
Score = 1106 bits (572), Expect = 0.0
Identities = 587/592 (99%)
Strand = Plus / Plus
Query: 1 ttatataacccattaaaaagtgttggcagaactatctcctggcttgtgctatgataagcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttatataacccattaaaaagtgttggcagaactatctcctggcttgtgctatgataagcg 260
Query: 61 tatcgtaatgtagaagagaaaatggctaacgtggccattcaacccggtataccttgtcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tatcgtaatgtagaagagaaaatggctaacgtggccattcaacccggtataccttgtcaa 320
Query: 121 tggtcagtcatatatattctggtaaaataaggtagaagggctatttctttgagctcagcc 180
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 321 tggtcagtcatatatattctggtaaaataaggtaggagggctatttctttgagctcagcc 380
Query: 181 tggactcttatcagcatctatcctttcaaagatctctaagtccttgcttcaagccacaga 240
|||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 381 tggactcttatcagtatctatcctttcaacgatctctaagtccttgcttcaagccacaga 440
Query: 241 tttctcccttagtgaagcagaaacattgcatgctctgttgttcctgtaatggccactatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttctcccttagtgaagcagaaacattgcatgctctgttgttcctgtaatggccactatc 500
Query: 301 agtttggcacttcatcttgacctcacagccatcctgaaaatcgcctctgttgtttttcag 360
||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 501 agtttggcacttcatcttgacctcagagccatcctgaaaatcgtctctgttgtttttcag 560
Query: 361 aagatgagctcagtctttgaagaacaagagctgtgaacagtaaaccaggactctacttag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aagatgagctcagtctttgaagaacaagagctgtgaacagtaaaccaggactctacttag 620
Query: 421 tctgggcctccccacagcaaagaaaaagagctgaatgctatgcctataaatggctgcttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tctgggcctccccacagcaaagaaaaagagctgaatgctatgcctataaatggctgcttt 680
Query: 481 cagaatgaagaaactcattagaagaaattgcatcattttgtaaaacatatgtgaagcaga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cagaatgaagaaactcattagaagaaattgcatcattttgtaaaacatatgtgaagcaga 740
Query: 541 gtatcaagaaaaaacacacgtagcctttgtgaaaacaattatacaatttggc 592
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gtatcaagaaaaaacacacgtagcctttgtgaaaacaattatacaatttggc 792
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 592
Length of database: 992
Length adjustment: 10
Effective length of query: 582
Effective length of database: 982
Effective search space: 571524
Effective search space used: 571524
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
