Query= MSMg01no083_n24.b1 MSMg01no083_n24.b1 CHROMAT_FILE:
MSMg01no083_n24.b1 PHD_FILE: MSMg01no083_n24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:33:44 2005
(244 letters)
>mm_chr3_147428308_147428951
Length = 644
Score = 433 bits (224), Expect = e-126
Identities = 239/244 (97%)
Strand = Plus / Minus
Query: 1 aaaagatgaggtccttgtgaacttgggtcaccatgtcagctatacattttatctctacgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aaaagatgaggtccttgtgaacttgggtcaccatgtcagctatacattttatctctacgg 385
Query: 61 aaattaagatgggagtacatcttcttgattgagggataaatatttgagagttttctggta 120
||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 384 aaagtaagatgggagtacatcttcttgattgagggataaatattttagagttttctggta 325
Query: 121 tctgtaatcaaatttgaccctacctcgctttatcagcataatctaaaaatataagtgcac 180
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tatgtaatcaaatttgaccctacctcgctttatcagcataatctaaaaatataagtgcac 265
Query: 181 tgaatgtcagtcgaagtcacagtggattgacagcttggagttgatagaattagaggaacc 240
||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 264 tgaatgtcagtggaagtcacagtggagtgacagcttggagttgatagaattagaggaacc 205
Query: 241 tgag 244
||||
Sbjct: 204 tgag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no083_n24.g1 MSMg01no083_n24.g1 CHROMAT_FILE:
MSMg01no083_n24.g1 PHD_FILE: MSMg01no083_n24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:33:44 2005
(455 letters)
>mm_chr3_147288769_147289623
Length = 855
Score = 822 bits (425), Expect = 0.0
Identities = 446/455 (98%), Gaps = 4/455 (0%)
Strand = Plus / Plus
Query: 1 atgcctttggagagagggaaaattagcctctcccaggggtaagctctccaagtgattatt 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 205 atgcctttggagagagggaaaattagcctctcccaggggtgagctctccaagtgattatt 264
Query: 61 caatacaaaatggtcaaccctgctgggctcagtggtgaacatgtttaattccagcactgg 120
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 caatacaaaacggtcaaccctgctgggctcagtggtgaacatgtttaattccagcactgg 324
Query: 121 cagatgtgaggcaggtgaatcactgtgactttgaagtcgatttagtctacacagtgagtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cagatgtgaggcaggtgaatcactgtgactttgaagtcgatttagtctacacagtgagtt 384
Query: 181 ccaccacagccagagttacacaaagagagccagttccacaaatgaatgaatgaatgaatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ccaccacagccagagttacacaaagagagccagttccacaaatgaatgaatgaatgaatg 444
Query: 241 aatgataaataaataaatgagacaacagtggtcagttctgaaatcatatacacacaagcc 300
| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 a----taaataaatacatgagacaacagtggtcagttctgaaatcatatacacacaagcc 500
Query: 301 acactaagtgacacagcagtttacgtttatatatttatgtatctgtgtgtgcatgtacac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acactaagtgacacagcagtttacgtttatatatttatgtatctgtgtgtgcatgtacac 560
Query: 361 atatgagtacacacatgcacacgtgagtaacagttttaaacagtccatccgtttgatcag 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 561 atatgagtacacacatgcacacgtgagtaacagttttaaacagtccatccgtttgatcgg 620
Query: 421 ggttaaggagggagtgagcgcagttgaaacgagga 455
||||||||||||||||||| |||||||||||||||
Sbjct: 621 ggttaaggagggagtgagcacagttgaaacgagga 655
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 855
Length adjustment: 10
Effective length of query: 445
Effective length of database: 845
Effective search space: 376025
Effective search space used: 376025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
