Query= MSMg01no084_c18.b1 MSMg01no084_c18.b1 CHROMAT_FILE:
MSMg01no084_c18.b1 PHD_FILE: MSMg01no084_c18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:34:08 2005
(542 letters)
>mm_chr3_66243570_66244511
Length = 942
Score = 1009 bits (522), Expect = 0.0
Identities = 534/538 (99%)
Strand = Plus / Plus
Query: 5 gaattccacttgtgaagcttaaaatgaaggttctatgacaagaataggccgttgtgaaga 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccacttgtgaagcttaaaatgaaggttctatgacaagaataggccgttgtgaaga 264
Query: 65 taaagaaaatagtgatgttggaatgaagtcgactctgcaaaggtaaaactatttaggggc 124
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 taaagaaaatagtgatgttggaatgaagtcgactctgcaaaggtaaaactatttaggggt 324
Query: 125 ccaaggtactgtgttggttacttttctgttactgtgataagacaccatgaccagtgtaac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ccaaggtactgtgttggttacttttctgttactgtgataagacaccatgaccagtgtaac 384
Query: 185 ttagacaagaaggagattatttgaagaaggttcaagtttataatggcagggacaggacat 244
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttagacaagaatgagattatttgaagaaggttcaagtttataatggcagggacaggacat 444
Query: 245 aaacaggaggaaggatgccactaccatgtaccacaaacaaatgccactaatgccatggct 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aaacaggaggaaggatgccactaccatgtaccacaaacaaatgccactaatgccatggct 504
Query: 305 taaggatagacctgattagggcaatagtgaatggagaaatgatgggcccggcttagctga 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 taaggatagacctgattagggcaatagtgaatggagaaatgatgggcccggcttagctga 564
Query: 365 gtgccctgatggagtgacatcagcagcagtctgaaacttgatgtgttattatatacatca 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gtgccctgatggagtgacatcagcagcagtctgaaacttgatgtgttattatatacatca 624
Query: 425 ggaatgaagaggaggctggttaggtcatctcggcaggaagtttctgtgtggtagtagttc 484
||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 625 ggaatgaagaggaggctggttaggtcacctcggtaggaagtttctgtgtggtagtagttc 684
Query: 485 caggttttagtccaggagaaagaagctgtgggctgataacttctgcttatgttggctt 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 caggttttagtccaggagaaagaagctgtgggctgataacttctgcttatgttggctt 742
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 542
Length of database: 942
Length adjustment: 10
Effective length of query: 532
Effective length of database: 932
Effective search space: 495824
Effective search space used: 495824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no084_c18.g1 MSMg01no084_c18.g1 CHROMAT_FILE:
MSMg01no084_c18.g1 PHD_FILE: MSMg01no084_c18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:34:08 2005
(445 letters)
>mm_chr3_66406054_66406898
Length = 845
Score = 601 bits (311), Expect = e-176
Identities = 326/331 (98%), Gaps = 1/331 (0%)
Strand = Plus / Minus
Query: 115 aaatatatttttaatattttttaattgtgtgtgagcacacatgaatgtaggtgcctacag 174
||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 843 aaatatacttttaata-tttttaattgtgtgtgagcacacatgaatgtaggtgcctacag 785
Query: 175 aggctaacaggctcccagatgcccctggaactggagttaaaggtagtgtgaactgcccca 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 aggctaacaggctcccagatgcccctggaactggagttaaaggtagtgtgaactgcccca 725
Query: 235 cctaggtgctgagaactgaactgtagtcttctgtaaaaatagtacatgttcttaactgct 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 cctaggtgctgagaactgaactgtagtcttctgtaaaaatagtacatgttcttaactgct 665
Query: 295 cagccttctcttcaatccccaaataaatcattttgaaagataatactaaactactagaga 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 cagccttctcttcaatccccaaataaatcattttgaaagataatactaaactactagaga 605
Query: 355 agatttgagtttgactatcaaaacaaggccaggctactgaacagtgactacataggtgtg 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 604 agatttgagtttgactatcaaaacaaggccaggctactgaacagtgactacatagatgtg 545
Query: 415 aaataacgccgtttatttgttccttaaaaag 445
|||||| ||||||||||||||| ||||||||
Sbjct: 544 aaataatgccgtttatttgttctttaaaaag 514
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 445
Length of database: 845
Length adjustment: 10
Effective length of query: 435
Effective length of database: 835
Effective search space: 363225
Effective search space used: 363225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
