Query= MSMg01no084_f17.b1 MSMg01no084_f17.b1 CHROMAT_FILE:
MSMg01no084_f17.b1 PHD_FILE: MSMg01no084_f17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:34:22 2005
(555 letters)
>mm_chr3_62493123_62494079
Length = 957
Score = 787 bits (407), Expect = 0.0
Identities = 420/425 (98%), Gaps = 2/425 (0%)
Strand = Plus / Minus
Query: 133 agttacccccaagatattttatattatttgtggctattgtgaagggagttgtttccctaa 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 957 agttacccccaagatattttatattatttgtggctattgtgaagggagttgtttccctaa 898
Query: 193 tttctttctcagcctgtttatcccttgcataaaggacggctactgatttatttgcattaa 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 897 tttctttctcagcctgtttatcccttgcataaaggacggctactgatttatttgcattaa 838
Query: 253 ttttatatctggccactttgctgaagttgtttatgagctgaagaagttctctggtagtgt 312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 837 ttttatatctggccactttgctgaagttgtttatgagctgaagaagttctctggtagtgt 778
Query: 313 ttttggggttgcttatgtgctcttgcataatattgattttttt--cagaacttatttacc 370
||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||
Sbjct: 777 ttttggggttgcttatgtgatcttgcataatattgatttttttttcagaacttatttccc 718
Query: 371 acttatgtcatcataatatggttgttcatttatcataaaagtatttatggtaatatagaa 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 acttatgtcatcataatatggttgttcatttatcataaaagtatttatggtaatatagaa 658
Query: 431 gataacactaaaatctcttgactggaaactcttaaggaatgtaacaaaactcaatttctt 490
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 gataacactaagatctcttgactggaaactcttaaggaatgtaacaaaactcaatttctt 598
Query: 491 tcttacaacttctaggctttctacctaggtccgagaaccaaacttttaccatgagagcaa 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 tcttacaacttctaggctttctacctaggtccgagaaccaaacttttaccatgagagcaa 538
Query: 551 tcatg 555
|||||
Sbjct: 537 tcatg 533
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 957
Length adjustment: 10
Effective length of query: 545
Effective length of database: 947
Effective search space: 516115
Effective search space used: 516115
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no084_f17.g1 MSMg01no084_f17.g1 CHROMAT_FILE:
MSMg01no084_f17.g1 PHD_FILE: MSMg01no084_f17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:34:22 2005
(327 letters)
>mm_chr3_62393945_62394671
Length = 727
Score = 580 bits (300), Expect = e-170
Identities = 321/328 (97%), Gaps = 2/328 (0%)
Strand = Plus / Plus
Query: 1 caggctcgaaccaggacatgtgagccgctggctggcctcaacagttgacaaccaatgaag 60
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 201 caggctcgaaccaggacatgtgagccgctggccagcctcaacagttgacaaccaatgaag 260
Query: 61 tatgtgatcttaaatcagaaactggctcagaaaagccacccaaagcaccatgggcaaaat 120
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tatgtgatcttacatcagaaactggctcagaaaagccacccaaagcaccatgggcaaaat 320
Query: 121 tcacatgagactgactgccaactttcggtaagggcattgctatttttacaatgtgttaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcacatgagactgactgccaactttcggtaagggcattgctatttttacaatgtgttaaa 380
Query: 181 aatag-ggaaagctgtttgaagaatatagtaaagctttttgttctatttttatagatgtt 239
||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatagtggaa-gctgtttgatgaatatagtaaagctttttgttctatttttatagatgtt 439
Query: 240 tttaaagttcaaaaatagtttacaataaagctttaaaaaatatgtagggagttcctggtc 299
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 440 tttaaagttcaaaaatagtttacaataaagttttaaaaaatatgtagggagttcctggtc 499
Query: 300 atttgaggtcaaataagaggcagccact 327
||||||||||||||||||||||||||||
Sbjct: 500 atttgaggtcaaataagaggcagccact 527
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 327
Length of database: 727
Length adjustment: 9
Effective length of query: 318
Effective length of database: 718
Effective search space: 228324
Effective search space used: 228324
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
