Query= MSMg01no085_a19.b1 MSMg01no085_a19.b1 CHROMAT_FILE:
MSMg01no085_a19.b1 PHD_FILE: MSMg01no085_a19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:35:17 2005
(368 letters)
>mm_chr3_149074303_149075071
Length = 769
Score = 627 bits (324), Expect = 0.0
Identities = 344/352 (97%), Gaps = 4/352 (1%)
Strand = Plus / Minus
Query: 18 gaattc-ataaaaactgattcccctttaagcagacggtggctggggctaatgatctgcaa 76
|||||| |||||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 446 gaattcaataaaaactgattcccggtgaagcagacggtggctggggctaatgatctgcaa 387
Query: 77 atgcgttcagcacagactgcaactgaagactttgtagaggaatataactccccaagttag 136
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 atgtgttcagcacagactgcaactgaagactttgtagaggaatataactccccaagttag 327
Query: 137 gaagagttcgagttcctgaagattcagcctgggaaacaaagcttgctggggatccacata 196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 gaagagttcgagttcctgaagattcagcctgggaaacaaagcttgctggggatccacata 267
Query: 197 aacagttgggtttacattataccaagtatttctatttaaaagtaaatcatgactagggct 256
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 266 aacagttgggtttacattataccaagtatttctatttaaaagtaaatc---actagggct 210
Query: 257 gggcagtggttcaattggcaaagtgtttgccttggaagactgaacacctgagtccaagcc 316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 gggcagtggttcaattggcaaagtgtttgccttggaagactgaacacctgagtccaagcc 150
Query: 317 cgacacccacacaaagagccaggcatggcaatgtgtgttgtaatctcaacaa 368
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 cgacacccacacaaagagccaggcatggcaatgtgtgttgtaatctcaacaa 98
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 368
Length of database: 769
Length adjustment: 9
Effective length of query: 359
Effective length of database: 760
Effective search space: 272840
Effective search space used: 272840
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no085_a19.g1 MSMg01no085_a19.g1 CHROMAT_FILE:
MSMg01no085_a19.g1 PHD_FILE: MSMg01no085_a19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:35:18 2005
(273 letters)
>mm_chr3_148938579_148939251
Length = 673
Score = 505 bits (261), Expect = e-147
Identities = 270/273 (98%)
Strand = Plus / Plus
Query: 1 cacaacctcccttgacttctccactatgattgattggaatgtggaattctgagctaaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacaacctcccttgacttctccactatgattgattggaatgtggaattctgagctaaaat 260
Query: 61 cccccctttctcccctaacttttcttttgtcgagggtgtgttatcagagcaacaggaaat 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaccctttctcccctaacttttcttttgtcgagggtgtgttatcagagcaacaggaaat 320
Query: 121 ggaacttggacaaggtatcagactatattgttctcaagaagaaatgaattgatacaatga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggaacttggacaaggtatcagactatattgttctcaagaagaaatgaattgatacaatga 380
Query: 181 ctttgtggttgtgcaataaatgtttctatttctgttttattttatgagtatagtgatagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctttgtggttgtgcaataaatgtttctatttctgttttattttatgagtatagtgatagt 440
Query: 241 aaagccagtagtgttaaaaatcgttacatctgg 273
|||||||||||||||||||||||||||||||||
Sbjct: 441 aaagccagtagtgttaaaaatcgttacatctgg 473
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 273
Length of database: 673
Length adjustment: 9
Effective length of query: 264
Effective length of database: 664
Effective search space: 175296
Effective search space used: 175296
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
