Query= MSMg01no085_b01.b1 MSMg01no085_b01.b1 CHROMAT_FILE:
MSMg01no085_b01.b1 PHD_FILE: MSMg01no085_b01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:35:20 2005
(402 letters)
>mm_chr3_145435004_145435804
Length = 801
Score = 658 bits (340), Expect = 0.0
Identities = 385/400 (96%), Gaps = 2/400 (0%)
Strand = Plus / Plus
Query: 1 atggagacatgaatgtaaaggccgtctgtaacgcactgtgactatgggtattagagcgtg 60
|||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||
Sbjct: 201 atggagacatgaatgtaaagaccgtctgtaa-ggactgtgactatgggtattagagcgta 259
Query: 61 gctggctttgaacattaaactcagcatctacatcccgctgttcccgcacattccaggatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gctggctttgaacattaaactcagcatctacatcccgctgttcccgcacattccaggatg 319
Query: 121 aaccttcagctccatggctctctccagaaactaagagccagttcagggctgcctgggatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aaccttcagctccatggctctctccagaaactaagagccagttcagggctgcctgggatg 379
Query: 181 accccgcactctttgggtgcagttctgagtgtagagtcttcccagcctaagggaccattg 240
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 380 accccgcactctttgggtgcagttctgagtgtagagtcttcccaggctaagggaccattg 439
Query: 241 agcgaatggaaaaccttcaagttaggagagaggcaggagatgaatgaccttccctgctgc 300
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 agcgaatggaaaacgttcaagttaggagagaggcaggagatgaatgaccttccctgctat 499
Query: 301 gtaccctgttaccggcattcagagttatgaacactccaagcacgactgacaggtatggtg 360
||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 500 gtaccctgttagcggcattcagagctaggaacactccaagcacgactgacaggtatggtg 559
Query: 361 ctctgtgcgctgtgctgtgctgtgctgtgctgcgctgtgc 400
||||||| ||| || ||||||||||||||||| |||||||
Sbjct: 560 ctctgtgtgctctg-tgtgctgtgctgtgctgtgctgtgc 598
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 402
Length of database: 801
Length adjustment: 9
Effective length of query: 393
Effective length of database: 792
Effective search space: 311256
Effective search space used: 311256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no085_b01.g1 MSMg01no085_b01.g1 CHROMAT_FILE:
MSMg01no085_b01.g1 PHD_FILE: MSMg01no085_b01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:35:20 2005
(331 letters)
>mm_chr3_145587361_145588091
Length = 731
Score = 611 bits (316), Expect = e-179
Identities = 319/320 (99%)
Strand = Plus / Minus
Query: 12 tgcgttcagctggcgagctttccgcagcccccgatagagaccagtttcacccatctgctc 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 tgcgttcagctggcgagctttccgcagcccccgatagagaccagtttcacccatctgctc 472
Query: 72 tacgcccggggatgcctggtccaaagcccgctgtgggcacactccggcggctccctaggc 131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 tacgcccggggatgcctggtccaaagcccgctgtgggcacactccggcggctccctaggc 412
Query: 132 tagcagctcccgcggcggtggcgtgggatgggggatcggcaggatggaaagccaccagcg 191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 tagcagctcccgcggcggtggcgtgggatgggggatcggcaggatggaaagccaccagcg 352
Query: 192 acgagcggatggcaaggaaacatccaagcccaccgacaggcttaaccgcggactcccggg 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 acgagcggatggcaaggaaacatccaagcccaccgacaggcttaaccgcggactcccggg 292
Query: 252 tcgctggtggatcgtctccagccagctcccgggaagcaggccggtcgtgctgtgccagga 311
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 291 tcgctggtggatcgtctccagccagctcccgggaagcaggcaggtcgtgctgtgccagga 232
Query: 312 ccccgcgctcttccgacctg 331
||||||||||||||||||||
Sbjct: 231 ccccgcgctcttccgacctg 212
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 331
Length of database: 731
Length adjustment: 9
Effective length of query: 322
Effective length of database: 722
Effective search space: 232484
Effective search space used: 232484
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
