MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-085J06
Chromosome	3 (Build37)
Map Location	135,671,966 - 135,672,533
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC100039290, EG620439, Cenpe, Bdh2, C80638, 4933425K02Rik, Zcd2, Ube2d3, Manba, LOC668745, Nfkb1, ENSMUSG00000045520, Slc39a8, LOC100039350
Downstream gene	LOC383923, Bank1, LOC100039477, LOC668868, Ppp3ca, LOC668870
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100039290 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039290
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins pseudo : _no_value

name	EG620439 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:620439 MGI:3646424
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	Cenpe (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:229841 MGI:1098230
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Bdh2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69772 MGI:1917022
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	C80638 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:97086 MGI:2140077
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4933425K02Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74446 MGI:1921696
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zcd2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67006 MGI:1914256
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ube2d3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66105 MGI:1913355
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Manba (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110173 MGI:88175
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668745 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668745
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 20 mRNAs, 184 ESTs, 8 Proteins pseudo : _no_value

name	Nfkb1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18033 MGI:97312
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	ENSMUSG00000045520 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:791324 MGI:3642121
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Slc39a8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67547 MGI:1914797
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039350 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039350
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 14 ESTs, 1 Protein

name	LOC383923 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:383923
definition	note : eukaryotic translation initiation factor 2C, 2 pseudogene pseudo : _no_value

name	Bank1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:242248 MGI:2442120
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039477 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039477
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 1 Protein

name	LOC668868 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668868
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Ppp3ca (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19055 MGI:107164
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668870 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668870
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 155 ESTs, 4 Proteins pseudo : _no_value

name	EG620439 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:82891748 GeneID:620439 MGI:3646424
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : predicted gene, EG620439 transcript_id : XM_884831.1

name	Cenpe (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:115648100 GeneID:229841 MGI:1098230
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : centromere protein E transcript_id : NM_173762.4

name	Bdh2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23956201 GeneID:69772 MGI:1917022
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : 3-hydroxybutyrate dehydrogenase, type 2 transcript_id : NM_027208.1

name	C80638 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142368598 GeneID:97086 MGI:2140077
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence C80638 transcript_id : NM_178877.5

name	4933425K02Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142369459 GeneID:74446 MGI:1921696
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4933425K02 gene transcript_id : NM_028946.2

name	Zcd2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254510 GeneID:67006 MGI:1914256
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger, CDGSH-type domain 2 transcript_id : NM_025902.2

name	Ube2d3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142366385 GeneID:66105 MGI:1913355
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast) transcript_id : NM_025356.3

name	Manba (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31980635 GeneID:110173 MGI:88175
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mannosidase, beta A, lysosomal transcript_id : NM_027288.2

name	Nfkb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117606363 GeneID:18033 MGI:97312
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nuclear factor of kappa light chain gene enhancer in B-cells 1, p105 transcript_id : NM_008689.2

name	ENSMUSG00000045520 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149251941 GeneID:791324 MGI:3642121
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : predicted gene, ENSMUSG00000045520 transcript_id : XM_001472713.1

name	Slc39a8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31541989 GeneID:67547 MGI:1914797
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 39 (metal ion transporter), member 8 transcript_id : NM_026228.2

name	LOC100039350 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149251943 GeneID:100039350
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 14 ESTs, 1 Protein product : similar to Scoc protein transcript_id : XM_001472737.1

name	Bank1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110835718 GeneID:242248 MGI:2442120
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : B-cell scaffold protein with ankyrin repeats 1 transcript_id : NM_001033350.2

name	LOC100039477 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149251948 GeneID:100039477
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 1 Protein product : hypothetical protein LOC100039477 transcript_id : XM_001472930.1

name	Ppp3ca (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801787 GeneID:19055 MGI:107164
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein phosphatase 3, catalytic subunit, alpha isoform transcript_id : NM_008913.2

name	EG620439 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82891749 GeneID:620439 MGI:3646424
definition	codon_start : 1 product : similar to ribosomal protein S10 protein_id : XP_889924.1

name	Cenpe (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:115648101 GeneID:229841 MGI:1098230
definition	GO_component : GO:0000775 - chromosome, pericentric region [Evidence ISS]; GO:0000776 - kinetochore [Evidence IDA]; GO:0005874 - microtubule [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003777 - microtubule motor activity [Evidence IEA]; GO:0003774 - motor activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0008608 - attachment of spindle microtubules to kinetochore [Evidence TAS]; GO:0007018 - microtubule-based movement [Evidence IEA] codon_start : 1 note : kinesin 10; N-7 kinesin; centromere autoantigen E product : centromere protein E protein_id : NP_776123.3

name	Bdh2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23956202 CCDS:CCDS17853.1 GeneID:69772 MGI:1917022
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005737 - cytoplasm [Evidence ISS] GO_function : GO:0003858 - 3-hydroxybutyrate dehydrogenase activity [Evidence IEA] [Evidence ISS]; GO:0003674 - molecular_function [Evidence ND]; GO:0051287 - NAD binding [Evidence ISS]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006635 - fatty acid beta-oxidation [Evidence ISS]; GO:0008152 - metabolism [Evidence IEA] codon_start : 1 note : dehydrogenase/reductase (SDR family) member 6 product : 3-hydroxybutyrate dehydrogenase, type 2 protein_id : NP_081484.1

name	C80638 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:61098176 CCDS:CCDS17854.1 GeneID:97086 MGI:2140077
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] GO_function : GO:0015299 - solute:hydrogen antiporter activity [Evidence IEA] GO_process : GO:0006885 - regulation of pH [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC97086 protein_id : NP_849208.3

name	4933425K02Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312756 CCDS:CCDS17855.1 GeneID:74446 MGI:1921696
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] GO_function : GO:0015299 - solute:hydrogen antiporter activity [Evidence IEA] GO_process : GO:0006885 - regulation of pH [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : hypothetical protein LOC74446 protein_id : NP_083222.1

name	Zcd2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21728370 CCDS:CCDS17856.1 GeneID:67006 MGI:1914256
definition	codon_start : 1 product : zinc finger, CDGSH-type domain 2 protein_id : NP_080178.1

name	Ube2d3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384718 GeneID:66105 MGI:1913355
definition	GO_function : GO:0016874 - ligase activity [Evidence IEA] GO_process : GO:0043161 - proteasomal ubiquitin-dependent protein catabolism [Evidence IDA]; GO:0006464 - protein modification [Evidence IEA] codon_start : 1 product : ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast) protein_id : NP_079632.1

name	Manba (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31980636 CCDS:CCDS17857.1 GeneID:110173 MGI:88175
definition	GO_component : GO:0005764 - lysosome [Evidence TAS] GO_function : GO:0004567 - beta-mannosidase activity [Evidence IDA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0043169 - cation binding [Evidence IEA]; GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA] GO_process : GO:0005975 - carbohydrate metabolism [Evidence IEA]; GO:0006516 - glycoprotein catabolism [Evidence IDA] codon_start : 1 exception : mismatches in translation product : mannosidase, beta A, lysosomal protein_id : NP_081564.2

name	Nfkb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:117606364 CCDS:CCDS17858.1 GeneID:18033 MGI:97312
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] [Evidence IC] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0016566 - specific transcriptional repressor activity [Evidence IDA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0048535 - lymph node development [Evidence TAS]; GO:0045083 - negative regulation of interleukin-12 biosynthesis [Evidence IDA]; GO:0045892 - negative regulation of transcription, DNA-dependent [Evidence IDA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : p50 subunit of NF-kappaB; nuclear factor-kappaB p50; NF kappaB1; p50 subunit of NF kappaB; nuclear factor kappaB p50 product : nuclear factor kappa-B, subunit 1 protein_id : NP_032715.2

name	ENSMUSG00000045520 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149251942 GeneID:791324 MGI:3642121
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472763.1

name	Slc39a8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31541990 CCDS:CCDS17859.1 GeneID:67547 MGI:1914797
definition	codon_start : 1 exception : mismatches in translation product : solute carrier family 39 (metal ion transporter), member 8 protein_id : NP_080504.2

name	LOC100039350 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149251944 GeneID:100039350
definition	codon_start : 1 product : similar to Scoc protein protein_id : XP_001472787.1

name	Bank1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110835719 GeneID:242248 MGI:2442120
definition	GO_function : GO:0019901 - protein kinase binding [Evidence ISS]; GO:0005102 - receptor binding [Evidence ISS] GO_process : GO:0006874 - calcium ion homeostasis [Evidence ISS] codon_start : 1 product : B-cell scaffold protein with ankyrin repeats 1 protein_id : NP_001028522.2

name	LOC100039477 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149251949 GeneID:100039477
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472980.1

name	Ppp3ca (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:42415473 CCDS:CCDS17860.1 GeneID:19055 MGI:107164
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0030018 - Z disc [Evidence IDA] GO_function : GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004721 - phosphoprotein phosphatase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006816 - calcium ion transport [Evidence IMP]; GO:0016311 - dephosphorylation [Evidence IDA]; GO:0000082 - G1/S transition of mitotic cell cycle [Evidence IMP]; GO:0006606 - protein import into nucleus [Evidence IDA]; GO:0006950 - response to stress [Evidence IDA] codon_start : 1 note : PP2BA alpha; PP2B alpha 1 product : protein phosphatase 3, catalytic subunit, alpha isoform protein_id : NP_032939.1

name	LOC100039290 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039290
definition	number : 1 pseudo : _no_value

name	LOC668868 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668868
definition	number : 1 pseudo : _no_value

name	LOC668745 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149251945 GeneID:668745
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 20 mRNAs, 184 ESTs, 8 Proteins product : similar to ornithine decarboxylase antizyme 2 pseudo : _no_value transcript_id : XR_030910.1

name	LOC668870 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149251950 GeneID:668870
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 155 ESTs, 4 Proteins product : similar to ribosomal protein L36a pseudo : _no_value transcript_id : XR_030986.1

clone name	MSMg01-354K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-143B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347H14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-457M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-203C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-436B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-096O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110G09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-185C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-292B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-202I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-303H21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-339K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-208O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-406D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-523D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-086B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334H24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-085J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126A22
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-277O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-351P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-269K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-144K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079P23
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-061I13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-260O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-128J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-103K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-534O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-116D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-276N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-099L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-127K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-192B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-144L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-163N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-309C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500J20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059B13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-119O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-521J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-391A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486F18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-278N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139H19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-300E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-300F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-389E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-323M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-326D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-235A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248C11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269I13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-079H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135M13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110A14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174P05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058I11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192I07
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-085J06.T7 (MSMg01no085_j06.b1)	MSMg01-085J06.TJ (MSMg01no085_j06.g1)
ACC	AG305116	AG305117
length	1,325	1,268
length of high quality (start - end)	64 (113 - 176)	564 (74 - 637)
definition	CHROMAT_FILE: MSMg01no085_j06.b1 PHD_FILE: MSMg01no085_j06.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:36:32 2005	CHROMAT_FILE: MSMg01no085_j06.g1 PHD_FILE: MSMg01no085_j06.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:36:32 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTCTGA TTACATAATATCCCTCCATTCACCTCATTTGTTTATCTTCTTTGAACACA AGACCTATAAGATACTTTCTCTATGCATGTAACTAAGCCGTGTGTGTGTG TGTGTGTGTGTGTGTGTGTGTGTGTGTTTCTTCTCTTTCCTTCCTCCTTT TTTCTCCCTTTCCTTTTCTTCCTTTCCTTTTCTCTTCTTCCTTTTTTTCT TCCCTCTTTCTTCTCTCTTTTTTTTCCTTCTTTTTTCTTCTTTCTTCTTT TTCCTCTTCTCTTTTCTTTTTTTTTTTTCTTTTCTTCCTTCTTTCTTTTT TTCCTTTTCTTCTTTCTTCTTTCTTTCTTTTTCTTTCTCTCTATCTCTCT TTTTTTTTTTCCCTTCATCTTTTTTTCTCTCTTTTTCTTCTTCCTCTTCC TTTCTCCCCTTTTTCTTCTCCTCTCCTCTTTCTTTCTTTTTTTCTCTCTC CCTTTTTTCTTTTCTTACCTTTTCTTCTTTTTTCTTTTTTCTTCTTCTTT TCTTTCTTTCTCTTCTTTCTCTTTTCTTCTTTCTCCTCTTCTTCTTTTTC TTTTTCTTTCTTTTATCTCTCCCCCTCTCTTTTTTCTTTTTTTCTCTTTC CTTCTTTCTTCCTTCTTCTTCCTTTTTTTCCTTTTTTATTTTCTTCTCTC CTCCTCCTTCTTCTTCTCTCTTTTCTTCTCTTTTCTTTTTCCTTTCTTTC TCCTCTTTCTCTCTCTTTCTTTCTTTTTTTTTTTCTTCTTCTTTTCTTTC TCTCTCTTCTTTTCCCTCTTCTATTTCCTTCTTCCTTTACTCCTTTTTTT TTTTTCTTCCTTCTTTACTTCTTCTTTTTTCCTTTTTTCTCTCTTTTTCT CTTCTCTTTCTTTTTTTTCCTCCCTCTTCCTCTCTTCCTCCTTTCTTTTT CTTCTCTTTTTTTTTCCTCTCTCTTTTCTTTCTTTTCTTCTTTCCTTCCT CTTTTTTTCCTCTTCTTCCTTTCTTCTCTTTTTTCTTTCTTTCTCTTTCT TCTCTTCTCTTTTCTCTTTCCTTTTTTTTTTCTCTTCTCCTTTTTTNTTT CTTTCTTCTTTTTCTCTTTCCTCTTTTTTTACCCTTTTCTCTTTTCTTTC CTTCTCTCTTCTTTCCCCTCTTTCCTTCCTTTCCCCTCTTCCCTCCTTTC TCTTTCCTCTTTTTCCTTCTTTTTCTTCCTTTTCCCTCCTTCTCTTTCTC TCTTCTTTTATTTCCTTTCTTCTTCTTCCTTCTCCTTTCTCTTTCTCTTC TCCTCTTCTTTTCTTTCTCTTCTTC	NNTTGATGTAGCGAGGCTGGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXCTCAGATTCCAGTGCTTGTACAAGAGTCACTTT ACCCACAACATCATCTCCACATTTCCTAGAAACTCTACTTTTTCCTTTCC CCTGTATTTATTTCACATATTTGAATTGCAAAGTATTTTCAATTGTGTGT CACTCTCAGAGATTGCACTTTGGAGAGCAGAAAGAAGCAATAGGGTCAGA CAACCTTATACTTAATGAAAGGAGAAACAAGGTTTTCTTCTCCAGCCTTC TGTTTTATGAATCACAAAGCAGGTAAGTAAGTTCAAGCCTGATTTACAAA TCCCATGATCTGAAAGCCTTACGTATCTCTCCTTTGTGCTTGCTTAAAAA TATTTTTTTGAAGCTCACGATTAACGTAATTATATGTTAAAAAACCCTCA ACCATAGGCAAGTTATAAAATCAAAATTGTTTTAGCTCACCATGGGTCTT CAGATCTTTATTCTTCCCATTTCATTTCAGAATCACTGGTATTCTTATTC ATTAATTAACTACAAAACATTCTGCTGGAGTTTTAATTCCACCTGCAATG TCTTTGAAGGAAAATTTGGACAATACTGCATCTTATACTACTATTTCATT CTATTGACCCCTTTTACCAAATCAAGAAACTATTTCTTAGTTGAAGCATT TGATTTTCTTCATAAAATTTTGTTTACCCATCTCTGGATATTCTTAAATA ATTCCATTTTGATAGATTTTTCAATTATTTTTCCTTGTTTGTTTATATTC CTGTCGTCCATAATTAATTCTTTTTATTATTTATTTTTTTTCCCTTAATT TCTTTTTATTATTTTTTTTCTCCTTCTTTTTTTGTTTATCTTTTTTTTTT ATTCTTTTTTTTTCTCATTATTTATTTTTTTCTTTTCAACATATTATTTT TTCTTTTTTCTTTTCTATATTATATTCTCTTTATTTTCCCTATTTCTATT TTTTTTATTATTATCTTTTCTCTATTCCTTTTTTTTTACATTCATTCTAA TTTTTCTTTTTATTTTATTTTTTCTTTTTCCCCCCTTNTTTAATTTATTT TTTTATTATTTATTTTATTATTTATATATTACTATTTAATTATATAAATA TTATTGTTATACTTTAATATATAATAAATTATATTTATTTATACTTTTTA TTTATCATATTATTTATTTAATTTCTTCATTTTTCATATATTATTACTTA TCCCGATCTATTTCTTTT
quality values	Open. Hide. 8 8 8 11 13 10 10 12 22 17 21 13 15 9 11 11 18 13 14 14 23 21 31 31 31 42 37 40 40 43 43 43 39 43 43 35 26 26 28 27 39 43 43 53 53 57 50 57 57 50 53 36 33 33 33 33 33 23 21 8 10 8 8 10 10 12 11 12 17 21 19 23 33 33 37 36 44 44 53 53 53 42 43 43 43 42 42 53 53 53 53 53 50 59 59 59 59 59 27 27 8 7 6 8 8 10 17 15 25 22 22 12 22 22 33 33 43 47 42 36 36 42 42 42 53 57 47 40 47 47 42 42 42 32 32 24 24 30 42 42 54 57 57 68 68 68 68 68 57 57 48 48 48 48 48 57 57 57 57 57 57 43 43 43 43 43 39 44 37 37 23 23 18 17 12 12 13 10 10 10 8 8 6 6 8 8 9 11 9 12 12 11 9 9 9 9 9 8 13 8 7 8 6 6 8 8 8 8 8 8 8 8 8 8 8 8 8 10 12 12 8 7 6 8 8 9 10 9 10 8 8 7 6 8 6 8 8 8 10 11 11 16 16 16 12 12 12 12 8 8 8 8 8 10 10 12 8 8 8 8 8 8 8 8 8 9 9 10 13 13 19 18 13 13 11 11 10 11 12 10 8 8 8 8 8 8 8 8 8 8 8 8 10 11 10 10 10 8 13 10 8 6 6 8 8 8 6 7 6 8 8 10 10 10 10 9 11 12 12 11 11 16 16 15 15 19 10 10 10 10 10 10 10 8 8 9 9 9 8 8 8 8 8 8 21 16 8 8 9 9 9 8 9 9 9 8 10 6 6 8 8 9 8 8 8 8 8 8 10 12 12 10 10 10 19 11 8 8 8 8 8 8 6 6 12 6 9 8 12 9 10 9 8 8 8 10 13 12 8 8 8 12 19 27 34 23 12 7 6 8 8 10 15 10 10 6 6 8 6 8 8 8 8 8 8 6 6 8 6 6 8 8 9 9 10 10 9 8 8 8 10 8 9 11 11 8 8 6 7 8 8 10 9 12 12 11 12 11 11 11 11 8 10 7 6 8 8 10 9 11 9 8 8 8 8 10 8 8 8 8 10 11 13 13 9 9 10 10 13 10 13 12 6 6 8 6 6 8 8 21 19 15 11 10 15 10 10 10 7 6 8 10 8 8 9 9 9 9 9 9 13 15 15 10 10 8 8 8 12 12 10 10 10 15 8 8 8 8 8 8 8 8 8 8 10 8 8 8 8 9 9 13 10 10 10 9 11 8 8 8 6 6 8 8 9 9 12 10 8 8 10 8 8 8 10 8 8 8 8 8 14 10 14 8 8 8 8 8 8 9 11 8 8 6 6 7 6 10 9 15 10 10 8 10 8 8 8 8 10 11 10 12 10 9 9 9 10 9 9 10 10 10 9 8 8 8 8 10 8 8 8 10 9 10 9 9 10 10 10 10 11 8 8 8 8 8 8 8 12 8 8 8 14 12 15 14 9 8 8 7 6 8 8 10 7 7 8 6 6 8 10 10 8 9 10 10 12 10 14 13 8 8 9 9 16 15 12 12 12 18 14 9 9 10 10 12 8 8 6 7 7 6 8 8 8 8 9 10 10 9 9 8 8 8 10 9 9 8 8 6 6 8 8 6 6 8 8 8 6 6 8 8 8 6 7 8 10 8 10 10 9 10 8 8 8 6 6 10 10 12 9 9 13 13 16 14 14 9 9 12 12 12 8 8 8 11 12 10 12 10 8 8 8 8 8 8 12 10 17 15 13 9 9 10 10 10 10 7 6 6 6 8 8 8 8 8 8 8 8 8 9 13 13 10 8 8 8 8 8 11 8 10 8 12 8 8 8 8 8 8 8 6 6 8 8 9 8 8 10 8 9 9 12 12 17 18 14 8 6 6 6 8 6 8 9 9 9 9 10 10 13 13 13 13 13 14 13 10 10 10 10 10 6 6 8 6 6 8 8 8 8 7 12 9 9 10 10 11 10 10 10 12 12 13 12 8 8 8 8 8 8 8 12 9 10 10 9 8 8 8 8 8 8 8 8 10 8 10 8 8 8 8 9 11 11 11 11 10 10 13 16 10 8 8 6 7 8 8 11 11 11 10 8 8 8 8 8 8 8 8 8 11 18 12 10 10 13 13 10 9 9 9 9 9 9 11 9 13 10 13 13 15 10 10 6 6 6 6 8 8 8 10 6 6 8 8 6 7 10 8 11 10 8 8 8 7 6 8 8 9 8 10 8 8 6 6 8 8 8 8 8 10 13 11 9 9 9 6 8 6 6 8 8 8 8 8 8 10 10 9 8 8 8 8 8 8 9 9 9 9 10 8 10 11 8 8 8 9 9 10 16 11 10 10 10 11 10 10 8 8 8 8 8 8 8 10 10 8 8 12 10 8 8 13 12 8 8 8 10 10 11 11 13 11 11 11 15 12 8 8 7 8 13 9 9 8 8 8 8 8 8 13 15 10 11 3 0 3 11 11 12 15 10 10 8 10 10 10 15 12 12 10 8 6 6 8 8 11 6 6 8 13 15 24 21 19 10 10 12 12 8 8 6 7 7 8 8 8 13 6 7 8 10 13 17 10 10 10 11 8 8 8 8 8 8 8 8 8 8 8 8 8 8 12 11 11 12 12 18 19 19 11 8 8 8 8 8 8 13 17 9 9 9 10 9 9 9 10 10 9 11 10 11 8 8 6 7 8 8 8 8 8 10 11 8 10 10 10 17 19 16 10 10 10 10 8 8 8 7 9 12 13 16 11 10 15 11 9 9 9 8 12 8 10 10 10 18 18 23 16 18 19 19 11 12 11 11 13 13 8 8 6 6 8 10 14 15 12 9 9 8 10 10 10 12 8 8 6 9 9 10 10 10 6 6 8 10 8 9 9 10 8 8 8 7 7 8 13 13 13 6 6 8 6 7 7 7 8 8 8 8 8 10 8 11 11 18 13 12 8 9 9 9 10 17 8 8 10 8 8 8 12 12 11 11	Open. 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Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no085_j06.g1 MSMg01no085_j06.g1 CHROMAT_FILE:
MSMg01no085_j06.g1 PHD_FILE: MSMg01no085_j06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:36:32 2005
         (564 letters)



>mm_chr3_135671766_135672733
          Length = 968

 Score = 1002 bits (518), Expect = 0.0
 Identities = 554/568 (97%), Gaps = 4/568 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttccagtgcttgtacaagagtcactttacccacaacatcatctccacatttcctagaaac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttccagtgcttgtacaagagtcactttacccacaacatcatctccacatttcctagaaac 260

                                                                       
Query: 61  tctactttttcctttcccctgtatttatttcacatatttgaattgcaaagtattttcaat 120
           | || |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtattttttcctttcccctgtatttatttcacatatttgaattgcaaagtattttcaat 320

                                                                       
Query: 121 tgtgtgtcactctcagagattgcactttggagagcagaaagaagcaatagggtcagacaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtgtgtcactctcagagattgcactttggagagcagaaagaagcaatagggtcagacaa 380

                                                                       
Query: 181 ccttatacttaatgaaaggagaaacaaggttttcttctccagccttctgttttatgaatc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccttatacttaatgaaaggagaaacaaggttttcttctccagccttctgttttatgaatc 440

                                                                       
Query: 241 acaaagcaggtaagtaagttcaagcctgatttacaaatcccatgatctgaaagccttacg 300
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| 
Sbjct: 441 acaaagcaggtaagtaagttcaagcctgatttacaaaccccatgatctgaaagccttaca 500

                                                                       
Query: 301 tatctctcctttgtgcttgcttaaaaatatttttttgaagctcacgattaacgtaattat 360
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 501 tatctctcctttgtgcttgcttaaaaatatttttttgaagctcaagattaacgtaattat 560

                                                                       
Query: 361 atgttaaaaaaccctcaaccataggcaagttataaaatcaaaattgttttagctcaccat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atgttaaaaaaccctcaaccataggcaagttataaaatcaaaattgttttagctcaccat 620

                                                                       
Query: 421 gggtcttcagatctttattcttcccatttcatttcagaatcactggtattcttattcatt 480
           |||||| ||||||||||||||||||||||||||||||||||| || |||||||||| |||
Sbjct: 621 gggtctgcagatctttattcttcccatttcatttcagaatcaatgctattcttattaatt 680

                                                                       
Query: 481 aattaacta----caaaacattctgctggagttttaattccacctgcaatgtctttgaag 536
           |||||| ||    |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aattaattaattacaaaacattctgctggagttttaattccacctgcaatgtctttgaag 740

                                       
Query: 537 gaaaatttggacaatactgcatcttata 564
           ||||||||||||||||||||||||||||
Sbjct: 741 gaaaatttggacaatactgcatcttata 768


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 564
Length of database: 968
Length adjustment: 10
Effective length of query: 554
Effective length of database: 958
Effective search space:   530732
Effective search space used:   530732
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information