CAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATCCGCGGAATT
CTATTTCATTCCAGAAAGTGTTAACATAAGGCTGAGCCTGTTCTGTGACC
TTATTATGACAGCTTCTTCAAACTACCAAAGATAAAAGACAGGGGAAGTT
CAGAAACTATGTCCACTGTGCACACTCATGGTCTTGTGATACACTAACTT
TGGAAATGGAGCAAGAGTCCTACACGTAACACAAAGCAGTCAATCATGCT
TGAGTCCTTTCAGCTATGCTAATCATCGGGGATTTTTCCGAACCTAAAAT
TAATCTGTTAAAATAAAGACACAACAAATATTCAAATAGATAAGATCGTA
AAAACTGTATAGCCCTTTGACTCAGTGTGTTTGATATGTTATGCTTATCT
GCATTTTCTGTTTGGAATTCTTTCTATCCAAGATGATGGAAATAAATCCT
GGTGTAATCTCACCACACAGAGAGGCTGCAAACTTTGAATGGCAGATACA
AAATGATTGTATGATACAATATCGAGATTTTTAAAAACCCCAAATTATAT
GAATATGTTTACAAAAGCTCTATAACATCCAAGTGCTGTTTAAAGTGGTG
AAAATTGATAAGCAACCAAAATGACCAACAATGAATGCATGATTATCTTT
AAATTCATAATGTGAAAATATACATATTTGATTAAAATGAAATTATAAAG
A

GGAGGCGCCTGTTTCCGACTTGAGGTGAACTATAGAAGGTTACAGGACTT
CCTGATCTTTACAAAACTTTTATCATGAATGGGTGTTGGATCTTGTCACC
GCTTTTTCTGCATCTAACGAGATGATCATGTGGTTTTTGTCTTTGAGTTT
GTTTATATAATGGATTACATTGATGGATTTTCGTATATTAAACCATCCCT
GCATCCCTGGAATAAAACCTACTTGGTCAGTATGTATGATTGCTTTAATG
TGTTCTTGGATTCGGTTAGCGAGAATTTTATTAAGGATTTTTGCATCGAT
CGCTTAAGAGAAACTGGCCTGAAGCTCTCTATCTTTGTTGTATCCTTCTG
TGGTTTAGGTATCAGAGTATTAGTGGCTTCATAAAATGAGTTGGGTAGAG
TACCTTCTACTTCTATCTTGTGAAATAGTTTGTGCAGAACTGGAATTAGA
TCTTCTTTAAGGTCTGATAGAACTCTGCACTAAACCCGTCTGCGCCTGTG
CTTGTTTTGGTTGGGAGACTATTATTAACTGCTTCTATTTCTTTAGGGGA
TATGGGACTGTTTACAAGCTCATCTTGATCCTGATTCAACTTTGTGACCT
GCTACTTGTCCCGAAATTGTCCATTTTCTTCTATTTTTTTTTTTTTTTGG
CGACTATACTCTTTTGGCAAAAGAT

Query= MSMg01no086_j14.b1 MSMg01no086_j14.b1 CHROMAT_FILE:
MSMg01no086_j14.b1 PHD_FILE: MSMg01no086_j14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:38:24 2005
         (549 letters)



>mm_chr3_114973261_114974209
          Length = 949

 Score = 1023 bits (529), Expect = 0.0
 Identities = 544/549 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   gttaacataaggctgagcctgttctgtgaccttattatgacagcttcttcaaactaccaa 60
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gttaacataaggctgagcttgttctgtgaccttattatgacagcttcttcaaactaccaa 260

                                                                       
Query: 61  agataaaagacaggggaagttcagaaactatgtccactgtgcacactcatggtcttgtga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agataaaagacaggggaagttcagaaactatgtccactgtgcacactcatggtcttgtga 320

                                                                       
Query: 121 tacactaactttggaaatggagcaagagtcctacacgtaacacaaagcagtcaatcatgc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tacactaactttggaaatggagcaagagtcctacacgtaacacaaagcagtcaatcatgc 380

                                                                       
Query: 181 ttgagtcctttcagctatgctaatcatcggggatttttccgaacctaaaattaatctgtt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgagtcctttcagctatgctaatcatcggggatttttccgaacctaaaattaatctgtt 440

                                                                       
Query: 241 aaaataaagacacaacaaatattcaaatagataagatcgtaaaaactgtatagccctttg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaataaagacacaacaaatattcaaatagataagatcgtaaaaactgtatagccctttg 500

                                                                       
Query: 301 actcagtgtgtttgatatgttatgcttatctgcattttctgtttggaattctttctatcc 360
           ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||
Sbjct: 501 actcagtgtgtttgatatgctatgcttatctgcagtttctgtttggaattctttctaccc 560

                                                                       
Query: 361 aagatgatggaaataaatcctggtgtaatctcaccacacagagaggctgcaaactttgaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aagatgatggaaataaatcctggtgtaatctcaccacacagagaggctgcaaactttgaa 620

                                                                       
Query: 421 tggcagatacaaaatgattgtatgatacaatatcgagatttttaaaaaccccaaattata 480
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 621 tggcagatacaaaatgattgtatgatacaatattgagatttttaaaaaccccaaattata 680

                                                                       
Query: 481 tgaatatgtttacaaaagctctataacatccaagtgctgtttaaagtggtgaaaattgat 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgaatatgtttacaaaagctctataacatccaagtgctgtttaaagtggtgaaaattgat 740

                    
Query: 541 aagcaacca 549
           |||||||||
Sbjct: 741 aagcaacca 749


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 949
Length adjustment: 10
Effective length of query: 539
Effective length of database: 939
Effective search space:   506121
Effective search space used:   506121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)