CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCCTTTGATCTCGAAAATTGGTACTCAGGAAAGATGAACTCAAACACTT
TTAAGAGAATCATTATAGTACTAATATTATAGGTTATAATTCAGATTTTA
TAGTATTTAAACTAAGTCTGTAACCTCAGAAAGTTTCTATATAAAAAGTC
AGAAAAAAATAACTGAAAATAGGTGAACAGATAACGATCAGCTCATTTAA
TTTTGTATCCATTATACACCCTGGCAAGGCTGTTTAGTCAAAATTTTCTA
AAAGAAACTTTTCAAATGCATATTATTATGCACTATAATTGTAGTAATTC
CTAACTATACTATTGATTCCTATATTGTAATGATATCTTTCTCAGAAGTA
AATTTGAAATGCAAGCTTATATCATTATAAAATTGATAATTTATAAAATT
TATACAGATTATTATTGTATATTAGTCACATTTAGATTTCCTATATACAA
CATATTATAGAGAATAACAAATGTTAACTTGTTCAGAGTGTATGACTCAG
TCAGTAAATTGCTTGTTTTTTAAGTACTAGAGTTTGACTTCACTCTGAAG
AATTAATATTAAAAATGACTTTACAATGGCTTTGCAAACCTCAGACTCAC
TGTTTAGCTATCAAGTTCAAAGACAATGAAGTATCTGAA

CAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTTTCTCCAATGAGGATTTATTATGCAGT
TCTTACCATTTAGTTGTGCCCCAAGGTAATTTTGAAGCTATTATAAAAGG
TATTGTTTCCTTGGTTTCTTTCTCAATATGTTTTTTATTTGTATACAGAA
AAGCTTTAATTTTTACATAATAAGTTTTTGCCTTGCAGAAATTTAAATAT
TAAAAGTATTTATCAGCTACATGAATCCCCCTGTAGAATTTTTAGTTTCA
CCTGTGCCCACTATATCATGTGTAAATGAAGATGCTTTGGCTTCTTCCTT
TACTATTTTTTATCACCTTGATCCCTTTAAGTTGTATTATTGCTCTAGCT
AAGACTTTAAGTACTGTATTGAATAGGTATGGAGAGGCTGCACAACCTTT
CTTGTTTCTGGGTTTAGTGGAATTGATTTGAATTACTCCATTTCAGGTGA
TGTTAGCTAAGGGCTTTCTGTAAACTGCCTTTATTATGGTGTAATGTGTA
TATTCTTTATCTAGTTTCTTCAGTACTTTTATTATGAACGGACATTGGAT
TTTGTCTAAGGTCTTTTCTGTATCTAATTACATGATTATCATAATCACTT
TTAATTTCTTTCTTGAGGTACCTTGATTAAGGCACCTTATAGAAT

Query= MSMg01no087_c13.b1 MSMg01no087_c13.b1 CHROMAT_FILE:
MSMg01no087_c13.b1 PHD_FILE: MSMg01no087_c13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:39:10 2005
         (523 letters)



>mm_chr3_71006951_71007873
          Length = 923

 Score =  868 bits (449), Expect = 0.0
 Identities = 503/521 (96%), Gaps = 4/521 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcctttgatctcga-aa-attggtactcaggaaagatgaactcaaacacttttaag 62
           ||||| |||||| || || || ||||||||||||||||||||||||||||||||||||||
Sbjct: 600 gaatt-ctttgaact-gataacattggtactcaggaaagatgaactcaaacacttttaag 543

                                                                       
Query: 63  agaatcattatagtactaatattataggttataattcagattttatagtatttaaactaa 122
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 542 agaatcattatagtactaatattataggctataattcagattttatagtatttaaactaa 483

                                                                       
Query: 123 gtctgtaacctcagaaagtttctatataaaaagtcagaaaaaaataactgaaaataggtg 182
           ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 482 gtctgtaacctcagaaaatttctatataaaaagtcagaaaaaaataactgtaaataggtg 423

                                                                       
Query: 183 aacagataacgatcagctcatttaattttgtatccattatacaccctggcaaggctgttt 242
           ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 422 aacagataacggtcagctcatttaattttgtatccattatataccctggcaaggctgttt 363

                                                                       
Query: 243 agtcaaaattttctaaaagaaacttttcaaatgcatattattatgcactataattgtagt 302
           |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct: 362 agtcaaaattttctaaaagaaacttttcaaatgcatattattatgcacgatatttgtagt 303

                                                                       
Query: 303 aattcctaactatactattgattcctatattgtaatgatatctttctcagaagtaaattt 362
           ||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 302 aattcctaactaccctattgattcctatagtgtaatgatatctttctcagaagtaaattt 243

                                                                       
Query: 363 gaaatgcaagcttatatcattataaaattgataatttataaaatttatacagattattat 422
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gaaatgtaagcttatatcattataaaattgataatttataaaatttatacagattattat 183

                                                                       
Query: 423 tgtatattagtcacatttagatttcctatatacaacatattatagagaataacaaatgtt 482
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 182 tgtatattagtcacatttagatttcctatatacaacatattatagagaataaaaaatgtt 123

                                                    
Query: 483 aacttgttcagagtgtatgactcagtcagtaaattgcttgt 523
           ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 122 aacttgttcagagtgtatgactcggtcagtaaattgcttgt 82


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 523
Length of database: 923
Length adjustment: 10
Effective length of query: 513
Effective length of database: 913
Effective search space:   468369
Effective search space used:   468369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)