XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCA
ATCCTCATACCAATTTCAATGATATTCTTTAACAAAATAGAAGATAATAT
CCTGAAATTCTTATGGGAATAAAAATGACCACAAGTAGGCAAGATAATCC
TGAGCAGAAGAAACGCTATGTGCAAGGCAATTCTCAACCCTGAACCATCT
GAGAGAGCCATAGTGACCAAAATACAATGGCACTAGCACAAAACAGACAC
AAAGTTAATAGAAGTGATTCTTAAAAGCCCACAAAGTTACATCCATCTGA
CTCTTGACAAGGGTAAGATAATTGAGCGTGGGGAAACAGGTGATAAGTGA
TGGGGAGTGGATACCCGCATGCAGAAGTCTAAAGGGTCTCTCACTCGGGA
CAAAAAAAAAAAACACAGTGGACACAAAACCTTGATTCAAGAACCACAGC
TTTGGAATACTGGAGAAAATAATTCAAGCTACGGGAATAAGCAATGACAT
TGGAAAAGGTCTCCAGGGAATCTGCTAGGGAATCTGTTGAGTTATTATAA
ACCATATTTTCCTAGCTATTTTATCCCATATTGGTAATTTTTAAAATTTA
TTTGATTCTGTGTGTAAGCCATCTTTCTGTCTATATTTTACCTTTATAAC
TTATTTGATATCAACAATTGCAAGTACCTTATTGAATGTTTATTTAATAA
GCATGCTCTACTGCTTCAAGT

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTGTCATAGCTTCTTATTGCAACTG
TTACATCTTCTCCCCAGATTCATTTCCATCAAGTCTTAACAGAGCAGGCA
AGCCTTATGGTCAACCCTCTTGACAACATGACTAAGTTGTGGTGTATTTT
CAAATGGAGTAGAACTAAATACTAGATATAAGTAACATAGGATATAGAGA
TAAATGATAGCAATTAAAGCATTCCAAATTTGTTCTACTAGATAGCAACT
AATTAAATCCATGTACTGTATTTGGAGAGTTACTGAGGGAGGGGTTTTCT
ATGCCATGAAGCAATGTTCAGTGAAACTAATTCCCTGGTATAAATTTTCA
ATAAAGCTGATGAAAGTGCTATATGCTAATTAGTCTTAAAATGGAAAGAA
CATTTTTAAACTTAATTAACACTATGTTGTTTTCTGTGCACTGTTGACAG
AGACCAAGTTGTACAGGGAACTTCCATTATGAATGCTACACTTACTATAC
AAGCTAAGTGTGGCCTTTCACATTGTGAATCCATATTTTCCCCTGACAGA
GTCTCATGAAGATTAAATTTTATTCACAGAAAGAAATATCATTAGTGAAG
AATTATAATGGTTAGGCTCAAAAGAACAGCAGTAGATATTCTTTTAACTC
CATAAATCTTTCTATAAAGTTATAAT

Query= MSMg01no088_n16.g1 MSMg01no088_n16.g1 CHROMAT_FILE:
MSMg01no088_n16.g1 PHD_FILE: MSMg01no088_n16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:41:28 2005
         (541 letters)



>mm_chr3_117986192_117987132
          Length = 941

 Score = 1038 bits (537), Expect = 0.0
 Identities = 540/541 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tgtcatagcttcttattgcaactgttacatcttctccccagattcatttccatcaagtct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgtcatagcttcttattgcaactgttacatcttctccccagattcatttccatcaagtct 682

                                                                       
Query: 61  taacagagcaggcaagccttatggtcaaccctcttgacaacatgactaagttgtggtgta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 taacagagcaggcaagccttatggtcaaccctcttgacaacatgactaagttgtggtgta 622

                                                                       
Query: 121 ttttcaaatggagtagaactaaatactagatataagtaacataggatatagagataaatg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttttcaaatggagtagaactaaatactagatataagtaacataggatatagagataaatg 562

                                                                       
Query: 181 atagcaattaaagcattccaaatttgttctactagatagcaactaattaaatccatgtac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atagcaattaaagcattccaaatttgttctactagatagcaactaattaaatccatgtac 502

                                                                       
Query: 241 tgtatttggagagttactgagggaggggttttctatgccatgaagcaatgttcagtgaaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgtatttggagagttactgagggaggggttttctatgccatgaagcaatgttcagtgaaa 442

                                                                       
Query: 301 ctaattccctggtataaattttcaataaagctgatgaaagtgctatatgctaattagtct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctaattccctggtataaattttcaataaagctgatgaaagtgctatatgctaattagtct 382

                                                                       
Query: 361 taaaatggaaagaacatttttaaacttaattaacactatgttgttttctgtgcactgttg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taaaatggaaagaacatttttaaacttaattaacactatgttgttttctgtgcactgttg 322

                                                                       
Query: 421 acagagaccaagttgtacagggaacttccattatgaatgctacacttactatacaagcta 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acagagaccaagttgtacagggaacttccattatgaatgctacacttactatacaagcta 262

                                                                       
Query: 481 agtgtggcctttcacattgtgaatccatattttcccctgacagagtctcatgaagattaa 540
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 261 agtgtggcctttcacattgtgaatccatattttcccctgaaagagtctcatgaagattaa 202

            
Query: 541 a 541
           |
Sbjct: 201 a 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 541
Length of database: 941
Length adjustment: 10
Effective length of query: 531
Effective length of database: 931
Effective search space:   494361
Effective search space used:   494361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)