Query= MSMg01no090_n14.b1 MSMg01no090_n14.b1 CHROMAT_FILE:
MSMg01no090_n14.b1 PHD_FILE: MSMg01no090_n14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:44:08 2005
(464 letters)
>mm_chr3_29430269_29431132
Length = 864
Score = 822 bits (425), Expect = 0.0
Identities = 449/457 (98%)
Strand = Plus / Minus
Query: 8 gaattcaatacactgaaggatgaactggaagtttatgctgtaatttgaatagcatgatca 67
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 664 gaattcaatacactgaaggatgaactggaagtttatgccgtaatttgaatagcatgatca 605
Query: 68 tgataagccaaccagcacctagcaagccctttgctatcaaacacagaaaaagcattagat 127
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 tgataagccaaccagcaactagcaagccctttgctatcaaacacagaaaaagcattagat 545
Query: 128 acaggattccagactgaaccgtgaacttgcatttaaaacttctattctgattgaaatgga 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 acaggattccagactgaaccgtgaacttgcatttaaaacttctattctgattgaaatgga 485
Query: 188 tgctgtactgctatcatccatgtgctattggcccatgcaagccataaaacagcattggcc 247
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 tgctgtactgctatcacccatgtgctattggcccatgcaagccataaaacagcattggcc 425
Query: 248 aagaagtagtgaggacttcatttctttcaggagagtatccaaatcatggcaaaaaggaca 307
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 424 aagaagtagtgaggacttcatttctttcaggagagtatccatatcatggcaaaaaggaca 365
Query: 308 ggcacttagatttctcattctttggtgaggtgagggtgcatcactggaaagcatgctgac 367
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 ggcacttagatttctcattctttggtgaggtgagggtgcatcactggaaagcatgctgaa 305
Query: 368 tgctggcatactaaccccttgctctcaattttcttgttgccttatctgtgagaatggatg 427
|||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 304 tgctagcatactaatcccttgctctcaattttcttgttgctttatctgtgagaatggatg 245
Query: 428 agactgtggttaatttctttctgtaagggaacagtga 464
|||||||||||||||||||||||||||||||||||||
Sbjct: 244 agactgtggttaatttctttctgtaagggaacagtga 208
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 864
Length adjustment: 10
Effective length of query: 454
Effective length of database: 854
Effective search space: 387716
Effective search space used: 387716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no090_n14.g1 MSMg01no090_n14.g1 CHROMAT_FILE:
MSMg01no090_n14.g1 PHD_FILE: MSMg01no090_n14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:44:08 2005
(292 letters)
>mm_chr3_29332421_29333111
Length = 691
Score = 549 bits (284), Expect = e-161
Identities = 290/292 (99%), Gaps = 1/292 (0%)
Strand = Plus / Plus
Query: 1 agcagcctattaagagtggatgtactgaagagctgaaagagcccaagaccctcgataaat 60
|||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 201 agcagcctattaagagtggatgtactgaagagctgaaagagcccaagaccat-gataaat 259
Query: 61 gctgagttctgttggtcaaaaaataaagcaaaagtgggatgcaggctatgacaactttgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gctgagttctgttggtcaaaaaataaagcaaaagtgggatgcaggctatgacaactttgc 319
Query: 121 ttaccttgacactaatatttcttgtctctttgtttggttggttttggtatttgtttcttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ttaccttgacactaatatttcttgtctctttgtttggttggttttggtatttgtttcttg 379
Query: 181 ttttatatgttgcatttcctggcatcataagggggttccgttaaatgcatggtgaagcac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ttttatatgttgcatttcctggcatcataagggggttccgttaaatgcatggtgaagcac 439
Query: 241 ctaatgtggacactgctcagaatggagagcagtattgtctttatgcattctc 292
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ctaatgtggacactgctcagaatggagagcagtattgtctttatgcattctc 491
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 691
Length adjustment: 9
Effective length of query: 283
Effective length of database: 682
Effective search space: 193006
Effective search space used: 193006
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
