Query= MSMg01no093_d02.b1 MSMg01no093_d02.b1 CHROMAT_FILE:
MSMg01no093_d02.b1 PHD_FILE: MSMg01no093_d02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:47:29 2005
(326 letters)
>mm_chr3_10472404_10473129
Length = 726
Score = 542 bits (280), Expect = e-158
Identities = 313/328 (95%), Gaps = 9/328 (2%)
Strand = Plus / Plus
Query: 1 gctgtgatcctgggcaaacacatgttcctttctgcctctgagccttcacttataaaacac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gctgtgatcctgggcaaacacatgttcctttctgcctctgagccttcacttataaaacac 260
Query: 61 aggaaatggcatcttttctaaatgtttaaaaagggtaagagaaataactatgcacacaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 261 aggaaatggcatcttttctaaatgtttaaaaagggtaagagaaataactat------aca 314
Query: 121 cacacaaacacacacattagatgaaattcttagaattgaaaattatagttgaattagctt 180
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 cacacaaacacagacattagatgaaattcttagaattgaaaattatagttgaattagctt 374
Query: 181 ttgctt-ttttcattaaatctgtatttaaacacattgctttagcatataaactgtgctgc 239
|||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 375 ttgcttcttttcattaaatctgtatttaaacacattgctttagaatataaactgtgctgc 434
Query: 240 aaaattttgtttgcctagtaaatttcaaaacaaaaaagtttttatttcttctgaaattat 299
||||||||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 435 aaaattttgtttgcctagtaaatttcaaaacaaaaaaattcagatttcttctgaaattat 494
Query: 300 actttcaattaaaaaaaa--tccaactg 325
|||||||||||||||||| ||||||||
Sbjct: 495 actttcaattaaaaaaaaaatccaactg 522
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 326
Length of database: 726
Length adjustment: 9
Effective length of query: 317
Effective length of database: 717
Effective search space: 227289
Effective search space used: 227289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no093_d02.g1 MSMg01no093_d02.g1 CHROMAT_FILE:
MSMg01no093_d02.g1 PHD_FILE: MSMg01no093_d02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:47:29 2005
(292 letters)
>mm_chr3_10533561_10534252
Length = 692
Score = 503 bits (260), Expect = e-147
Identities = 278/284 (97%)
Strand = Plus / Minus
Query: 8 gagaaaataaatcatcataaagaaaaaaagaaaaattagtgataacttaggatagagaat 67
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 gagaaagtaaatcatcataaagaaaaaaagaaaaattagtgataacttaggatagagaat 432
Query: 68 aatgaaatcattaaaaccagaataaataaaaattaagaaagttataaagaaaggtttcct 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 aatgaaatcattaaaaccagaataaataaaaattaagaaagttataaagaaaggtttcct 372
Query: 128 ttcaaaaattagatcctaaacaaatggagtctttatttaaactaagaaaaacatttaaaa 187
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 ttcaaaaattagaacctaaacaaatggagtctttatttaaactaagaaaaacatttaaaa 312
Query: 188 atacagatcgatacatgttcaacacttatactgtagttctatggtataatggtctgataa 247
||||||||| ||| |||||||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 311 atacagatctatagatgttcaacacttatactgtagttttatggtatagtggtctgataa 252
Query: 248 agatagcaggttccaattcctggagcctgtgaatgttacattgt 291
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 agatagcaggttccaattcctggagcctgtgaatgttacattgt 208
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space: 193289
Effective search space used: 193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
