TACCTATTGGGAGAGGATCCGCGGAATTCCTCCTCATGCAATCTTTCTAG
AATGCAAAATTCTATTGACCTTATATTTTCAACTCAATTTCTCTTACACC
ATTTAGGGAAAAGACAAACATTTTTGAATGGAAAGTTCATATTTCTACAT
AAAATCATAATATTAATATATAGAAATTACTAACATGTTCACGTAATATA
AGAAATACATGTTTGAGATGAAAATACAAAAATGAAAAACACCCATGGAG
CAGATTTGAAGGCACTTGGCAGAGCGCACTGTCAGAGGGTGGCAGGCAGG
TCCTTTGAAGCTAATGTTCACAAATTTCCTGGTGCTGCTGCCATCTTCCA
CAGGAGCAGCTTCTGAATGAGAAATATTTCTGTCTAATCCTGCTGAAGAC
AGATAAGTCTGCCAATTGAAACTGTAAAGTCCTGACAGCCAACAGCATCC
GTTTTGTAATAGCAGAAGACTGATGCTGGAATATCAGGAACGGAACAGCA
CTATCTGACAGCAAGAAACTAACATGTTTGACAAGAAATTGGGTCCATGA
TCATTGCAAGTCAAACAAGATGTCTTTTCATTCAACGCCTCAAAATTACC
TTCCTTTTCTAAGTTCAAGATTCATTTCATTACTGACATGTTCTTTTCTT
TTCTCCCTCATCAAGTTA

TTTATTTTTTCCATACACCCTCCTTTTTCCCTTTTATTTTTTTTTTTCNC
CNCCCAGNCCCACTATGATATGAXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAACTCTTCAGC
TGGGGAACGGCGGTAATGAAGTGTTCCCGTAACCCCGACTGTTGAGAAGG
ATTCAACTGCGTGAATTCAGAACTCTTCAGCTGGGGAATGGTGGTAATGA
AGTGTTTCCGTAAAACAGACTGTTGACAAGGATTCAACTGCGTGAATTCC
GAACTCTTCAGCTGGGGAATGGTGGTAATGAAGTGTTCCCGTAAAACAGA
CTGTTGATAAGGATTCCTCTGTGTGAATTTTGATCTCTTCAGCTGGGGAA
CAGGGTACCCGTAAGTATAGCTTTACTAGGTACGCCCAGTCTTGAACTTT
CTCACGAAATTCCTGACAGTCTATCTTAATTACAGAGGTAAATACCTTTT
CTAGGTACGTCTGGTCTCGAACTTTCTAACGAAATTCAAGACCGCCTATC
AAAAGTAAAGAGGGAAATAGCTTTACAAGGTATGTTTGCCCCTTGAACTT
TTTCTAGAGTTAGGAGCCTTTTTGTTCTTTTTCCCATGTTATCCAGTTGT
CAAAAGTAGGTCTGGAAAACTTCCTAATTGAATTCATGGCTATTTTTCAG
AATTAAATCGGCTCACATTTAGTCACCATCTCTGATTTATACTGGGTTCC
CCCACATATGTATCTTTGGCTTTCC

Query= MSMg01no094_c02.b1 MSMg01no094_c02.b1 CHROMAT_FILE:
MSMg01no094_c02.b1 PHD_FILE: MSMg01no094_c02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:49:38 2005
         (572 letters)



>mm_chr3_112449766_112450737
          Length = 972

 Score = 1042 bits (539), Expect = 0.0
 Identities = 557/563 (98%)
 Strand = Plus / Plus

                                                                       
Query: 10  gaattcctcctcatgcaatctttctagaatgcaaaattctattgaccttatattttcaac 69
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 gaattcctcctcatgcaatctttctagaatgcaaaattctattgaccttatattttcaac 269

                                                                       
Query: 70  tcaatttctcttacaccatttagggaaaagacaaacatttttgaatggaaagttcatatt 129
           ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 270 tcaatttctcttacaccgtttaaggaaaagacaaacatttttgaatggaaagttcatatt 329

                                                                       
Query: 130 tctacataaaatcataatattaatatatagaaattactaacatgttcacgtaatataaga 189
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 330 tctacataaaatcataatattaatatatagaaattactaacatgttcacgtaatataaaa 389

                                                                       
Query: 190 aatacatgtttgagatgaaaatacaaaaatgaaaaacacccatggagcagatttgaaggc 249
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 aatacatgtttgagatgaaaatacaaaaatgaaaaacacccatggagcagatttgaaggc 449

                                                                       
Query: 250 acttggcagagcgcactgtcagagggtggcaggcaggtcctttgaagctaatgttcacaa 309
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 acttggcagagcgcactgtcagagggtggcaggcaggtcctttgaagctaatgttcacaa 509

                                                                       
Query: 310 atttcctggtgctgctgccatcttccacaggagcagcttctgaatgagaaatatttctgt 369
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 atttcctggggctgctgccatcttccacaggagcagcttctgaatgagaaatatttctgt 569

                                                                       
Query: 370 ctaatcctgctgaagacagataagtctgccaattgaaactgtaaagtcctgacagccaac 429
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 ctaatcctgctgaagacagataagtctgccaattgaaactgtaaagtcctgacagccaac 629

                                                                       
Query: 430 agcatccgttttgtaatagcagaagactgatgctggaatatcaggaacggaacagcacta 489
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 630 agcatccgttttgtaatagcagaagactgatgctggaatatcaggaatggaacagcacta 689

                                                                       
Query: 490 tctgacagcaagaaactaacatgtttgacaagaaattgggtccatgatcattgcaagtca 549
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 690 tctgacagcaagaaactaacgtgtttgacaagaaattgggtccatgatcattgcaagtca 749

                                  
Query: 550 aacaagatgtcttttcattcaac 572
           |||||||||||||||||||||||
Sbjct: 750 aacaagatgtcttttcattcaac 772


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 972
Length adjustment: 10
Effective length of query: 562
Effective length of database: 962
Effective search space:   540644
Effective search space used:   540644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)