Query= MSMg01no095_g02.b1 MSMg01no095_g02.b1 CHROMAT_FILE:
MSMg01no095_g02.b1 PHD_FILE: MSMg01no095_g02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:22 2005
(638 letters)
>mm_chr3_94387103_94388140
Length = 1038
Score = 1120 bits (579), Expect = 0.0
Identities = 606/615 (98%), Gaps = 1/615 (0%)
Strand = Plus / Plus
Query: 25 agttggtgtttttggctatctggcaggatataaacttgatagaactgggtgcctggtgac 84
|||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 224 agttggtgtttttggcgatctggcaggatataaacttgatagagctgggtgcctggtgac 283
Query: 85 agcaagtaatgacagaaataatgcacatagcaatctaagccatcactgctccactttggt 144
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 284 agcaagtaatgacagaaataatgcacatagcaatctacgccatcactgctccactttggt 343
Query: 145 gtttgatttccccctactgataaggtcactagttaatccattcctgtttagtagatgttg 204
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 atttgatttccccctactgataaggtcactagttaatccattcctgtttagtagatgttg 403
Query: 205 tagaatacacaagattccacaaagcaaagacaaaggaaacagtatcagcctcctcaggta 264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 tagaatacacaagattccacaaagcaaagacaaaggaaacagtatcagcctcctcaggta 463
Query: 265 tcctcagttcttccccaccaagcaccatgtagataaagagctctgatgagtgatgttccc 324
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 ttctcagttcttccccaccaagcaccatgtagataaagagctctgatgagtgatgttccc 523
Query: 325 ctaacgcatcagagcctaagacacacaacttggaaaggttgccattctgtacaaaggaat 384
|||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 ctaaggtatcagagcctaagacacacaacttggaaaggttgccattctgtacaaaggaat 583
Query: 385 acagtagacttgctctttgtcctgagggggacattacttcatctcccaaagtgacatatt 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 acagtagacttgctctttgtcctgagggggacattacttcatctcccaaagtgacatatt 643
Query: 445 aacacaaccccc-aaccggagaaataacctggagataacgagccaggagtcttccttctt 503
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 aacacaaccccccaaccggagaaataacctggagataacgagccaggagtcttccttctt 703
Query: 504 ggcatccagcagaagaagaggagaagcaccaagaactacctttctcaacatgactatgta 563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 ggcatccagcagaagaagaggagaagcaccaagaactacctttctcaacatgactatgta 763
Query: 564 ccaagtctttacatctagagcttattaacgctttacagcactagcccagtccctgcttgg 623
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 ccaagtctttacatctagaacttattaacgctttacagcactagcccagtccctgcttgg 823
Query: 624 tagatgaggttacac 638
|||||||||||||||
Sbjct: 824 tagatgaggttacac 838
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1038
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1028
Effective search space: 645584
Effective search space used: 645584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no095_g02.g1 MSMg01no095_g02.g1 CHROMAT_FILE:
MSMg01no095_g02.g1 PHD_FILE: MSMg01no095_g02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:23 2005
(295 letters)
>mm_chr3_94747693_94748387
Length = 695
Score = 520 bits (269), Expect = e-152
Identities = 293/309 (94%), Gaps = 14/309 (4%)
Strand = Plus / Minus
Query: 1 ttttcccttgaggaaacaagaggtcagactccaagtaacccccaaatggcctaagcaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 ttttcccttgaggaaacaagaggtcagactccaagtaacccccaaatggcctaagcaact 251
Query: 61 ggtgcccacttggcataccagctggatcccaaagcatccaagaagatact---------- 110
|||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 250 ggtgcccacttggcataccagctggatcccaaagcatccaaggagatactctcgagcatg 191
Query: 111 a----gagggagcagggagaagttctcaccttgaccactaggggctccggctgacaggtt 166
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 actctgagggagcagggagaagttctcaccttgaccactaggggctccggctgacaggtt 131
Query: 167 aactcttggtcctccagcacttgcacagagcctcctctaacaatgctgcccccaaggaag 226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 aactcttggtcctccagcacttgcacagagcctcctctaacaatgctgcccccaaggaag 71
Query: 227 atctggaagcagggttcagagggaaagggggacaacggttacagatgtagtgatcatctt 286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 atctggaagcagggttcagagggaaagggggacaacggttacagatgtagtgatcatctt 11
Query: 287 aatgatcca 295
||||||||
Sbjct: 10 catgatcca 2
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 295
Length of database: 695
Length adjustment: 9
Effective length of query: 286
Effective length of database: 686
Effective search space: 196196
Effective search space used: 196196
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
