Query= MSMg01no098_b01.b1 MSMg01no098_b01.b1 CHROMAT_FILE:
MSMg01no098_b01.b1 PHD_FILE: MSMg01no098_b01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:55:02 2005
(213 letters)
>mm_chr3_51505319_51505931
Length = 613
Score = 356 bits (184), Expect = e-103
Identities = 196/200 (98%), Gaps = 1/200 (0%)
Strand = Plus / Minus
Query: 6 ggaattcctggattctctcaggctgtcgtgtgtgatgtccatcacgccgtgcgaacacca 65
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 ggaattcctggattgtctcaggctgtcgtgtgtgatgtccatcacgccgtgcgaacacca 285
Query: 66 tctgctccgtattatgctcgcagttgccaggctacctgctgtatgcaggaacacttgact 125
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 284 tctgctccgtattatgctcgcagttgccaggctacctgctgtacgcaggaacacttgact 225
Query: 126 gcctggctccacgtccgcagcggcggcccgggcggggcgggggacccagccctgattaag 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 gcctggctccacgtccgcagcggcggcccgggcggggcgggggacccagccctgattaag 165
Query: 186 ccatctgcgatgg-gggggg 204
||||||||| ||| ||||||
Sbjct: 164 ccatctgcgttggtgggggg 145
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 213
Length of database: 613
Length adjustment: 9
Effective length of query: 204
Effective length of database: 604
Effective search space: 123216
Effective search space used: 123216
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no098_b01.g1 MSMg01no098_b01.g1 CHROMAT_FILE:
MSMg01no098_b01.g1 PHD_FILE: MSMg01no098_b01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:55:02 2005
(390 letters)
>mm_chr3_51354201_51354990
Length = 790
Score = 677 bits (350), Expect = 0.0
Identities = 368/374 (98%), Gaps = 2/374 (0%)
Strand = Plus / Plus
Query: 18 gaatt-aactaagagtagcaagtgcccctagctgctgagccgccgctccagccctacttc 76
||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 gaattcaaccaagagtagcaagtgcccctagctgctgagccgccgctccagccctacttc 277
Query: 77 cacttccatgtcttgagaggaccaagtatgcagaactttctcagcccccccaccccaccc 136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 cacttccatgtcttgagaggaccaagtatgcagaactttctcagcccccccaccccaccc 337
Query: 137 ccaccctgttaaggaagatctacttgatgttttgtatacttcgtgaactggctggtccat 196
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 ccaccctgttgaggaagatctacttgatgttttgtatacttcgtgaactggctggtccat 397
Query: 197 acagaaaggccggggcacgtttgaagacatacagtttgcactggcttgccttttccctgc 256
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 398 acagaaaggccggggcacgtttgaagacatagagtttgcactggcttgccttttccctgc 457
Query: 257 gacatggatgcatggtcagtagagccatctacaccctggttaccactgcccaaactccta 316
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 458 gacatggatgcatggtcagtagagccatctacaccctggttaccactgcccaagctccta 517
Query: 317 aggcacacacttggttaccaccaacttgtttcacaaactccagccccaccccattggtat 376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 aggcacacacttggttaccaccaacttgtttcacaaactccagccccaccccattggtat 577
Query: 377 cctccccatcattt 390
| ||||||||||||
Sbjct: 578 c-tccccatcattt 590
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 390
Length of database: 790
Length adjustment: 9
Effective length of query: 381
Effective length of database: 781
Effective search space: 297561
Effective search space used: 297561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
