Query= MSMg01no098_c11.b1 MSMg01no098_c11.b1 CHROMAT_FILE:
MSMg01no098_c11.b1 PHD_FILE: MSMg01no098_c11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:55:10 2005
(272 letters)
>mm_chr3_41238704_41239375
Length = 672
Score = 464 bits (240), Expect = e-135
Identities = 260/268 (97%), Gaps = 4/268 (1%)
Strand = Plus / Plus
Query: 7 gaattccaaagtcccc--gaccagcatctggtaggagctttcttactggagatcctaagg 64
||||||||||| ||| |||||||||||||||||||||||||| || ||||||||||||
Sbjct: 207 gaattccaaag--cccaggaccagcatctggtaggagctttcttgctagagatcctaagg 264
Query: 65 ttggaagagaggttgggactgatgggtgcttgcttttacatctccctcttgtgacaatga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttggaagagaggttgggactgatgggtgcttgcttttacatctccctcttgtgacaatga 324
Query: 125 accgacttctgtgacaatgacattaaacgagtcctgaggcagagcttcatgaccaaagta 184
||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 accaacttgtgtgacaatgacattaaacgagtcctgaggcagagcttcatgaccaaagta 384
Query: 185 cctctttaaggtttcccttttcagcaccatggcactggagactaagtttccaaacatgaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cctctttaaggtttcccttttcagcaccatggcactggagactaagtttccaaacatgaa 444
Query: 245 atctttgggatgcactcataccacagca 272
||||||||||||||||||||||||||||
Sbjct: 445 atctttgggatgcactcataccacagca 472
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 272
Length of database: 672
Length adjustment: 9
Effective length of query: 263
Effective length of database: 663
Effective search space: 174369
Effective search space used: 174369
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no098_c11.g1 MSMg01no098_c11.g1 CHROMAT_FILE:
MSMg01no098_c11.g1 PHD_FILE: MSMg01no098_c11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:55:10 2005
(395 letters)
>mm_chr3_41426399_41427193
Length = 795
Score = 704 bits (364), Expect = 0.0
Identities = 370/372 (99%)
Strand = Plus / Minus
Query: 17 ggaattctgtgtagcaccctagaaatcataattcatacctttagtgtgtattgagccatt 76
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 562 ggaattctgtgtagcaccctagaaatcataattcattcctttagtgtgtattgagccatt 503
Query: 77 taattccttgaataaagtttcattcagtattttcacttgaagctagcccagtccttgaag 136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 taattccttgaataaagtttcattcagtattttcacttgaagctagcccagtccttgaag 443
Query: 137 agagaacgtgccagaagaacacaatatgatgtgtaaggaaaactgttagcacttggatct 196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 agagaacgtgccagaagaacacaatatgatgtgtaaggaaaactgttagcacttggatct 383
Query: 197 gtgaaaatagaaatgacactagtgtcttatgtaaactaatatatttattagggtaaaatt 256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gtgaaaatagaaatgacactagtgtcttatgtaaactaatatatttattagggtaaaatt 323
Query: 257 tattagggtaaaactaatataatgattagggtagaaagtaacagttttatttatacctaa 316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tattagggtaaaactaatataatgattagggtagaaagtaacagttttatttatacctaa 263
Query: 317 aataattcattggaaaattgtccaagatatgtgataactgtgctgatgtgtgtttgtgtg 376
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 262 aataattcattggaaaattgtccaagatatgtgataactgtgctgatgtgtgtgtgtgtg 203
Query: 377 tgtgtgtgtgtg 388
||||||||||||
Sbjct: 202 tgtgtgtgtgtg 191
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 395
Length of database: 795
Length adjustment: 9
Effective length of query: 386
Effective length of database: 786
Effective search space: 303396
Effective search space used: 303396
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
