CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CAGGCTAACCGTCATCAGAATCTAGATATTAATTAAAGACCAGTGGTGGA
ATAAGCATGAAGGAATGACTCAAAGACCTCTGTGTTGGTCCATTGTTTAC
ATAGATGTTGGTTTATTTCTTTGAATATATGAGACAGAATGAGAGCAGGC
CAATGGTCCACAGCAATGCAATGACAATATATAATGTGGGCATTTATCAG
GGTCAGCTGAAGAGCAAGTGAGGCTCCTATTTGGAATAACAGAGTAAGTT
TCCACCACTTATTTTGGCTGTCATCAACAGCATTTAGAAACATTTGCCTA
AACAGTCCCTCCAATACATATTTAAGAAACAAATTCAGCTTTCAAATCAA
AGTCGGGAGGCGCAAAGAGTGTTGCTATTTCACCAGATAATAGTTATAAA
GTAATAATCCTTAATGTCCTTCCCTTCTTCAACATTAAATACCTTTGACA
CATTAAAAACATTAAAGTAAGCCATCATTTTCTTTTTAATACTTCTTCAA
GGATAGAGTGTTAGAAAAATAATTGTGTCAGTCCCATGACAGTCATGATA
CCTCTTTTATAAATTTCCATTTTCAAGATTTTGTTTTTATTAAGGACCCT
CTCCCCATATGGAAGTAGTGGAAATCTGTTTACATTACAAGAGTAAGGGT
TAGAGTA

GAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAGAG
AAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAAT
CAAAACAACCCTAAGATTCCACCTCACACCAGTCAGAATGTCTAAGATCA
AAAATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAACA
CTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCACTCTGGAAATC
CGTCTGGCGGTTCCTCAGAAAATTGGACATAGTACTACCGGAGGATCCAG
CAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACTGGTAAGAAG
GACACATGCTCCACTATGTTCATAGCAGCATTATTTATAATAGCCAGAAG
CTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGT
GGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTT
ATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGA
GGTAACACATTCCCAAAGGAACTCACACAATATGTACTCACTGATAAGTG
GATATTAGCCCAAAACCTAGGATACCCTAGATATAAGATACAATTTTCCT
AAACTCATGTAA

Query= MSMg01no098_j19.b1 MSMg01no098_j19.b1 CHROMAT_FILE:
MSMg01no098_j19.b1 PHD_FILE: MSMg01no098_j19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:55:47 2005
         (620 letters)



>mm_chr3_24652237_24653256
          Length = 1020

 Score = 1168 bits (604), Expect = 0.0
 Identities = 616/620 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcagaatctagatattaattaaagaccagtggtggaataagcatgaaggaatgactcaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcagaatctagatattaattaaagaccagtggtggaataagcatgaaggaatgactcaaa 260

                                                                       
Query: 61  gacctctgtgttggtccattgtttacatagatgttggtttatttctttgaatatatgaga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gacctctgtgttggtccattgtttacatagatgttggtttatttctttgaatatatgaga 320

                                                                       
Query: 121 cagaatgagagcaggccaatggtccacagcaatgcaatgacaatatataatgtgggcatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 321 cagaatgagagcaggccaatggtccacagcaatgcaatgacaatatataatgtggacatt 380

                                                                       
Query: 181 tatcagggtcagctgaagagcaagtgaggctcctatttggaataacagagtaagtttcca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 381 tatcagggtcagctgaagagcaagtgaggctcctatttggaataacagagtaattttcca 440

                                                                       
Query: 241 ccacttattttggctgtcatcaacagcatttagaaacatttgcctaaacagtccctccaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccacttattttggctgtcatcaacagcatttagaaacatttgcctaaacagtccctccaa 500

                                                                       
Query: 301 tacatatttaagaaacaaattcagctttcaaatcaaagtcgggaggcgcaaagagtgttg 360
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 501 tacatatttaagaaacaaattcagctttcaaatcaaagtcgggaggggcaaagagtgttg 560

                                                                       
Query: 361 ctatttcaccagataatagttataaagtaataatccttaatgtccttcccttcttcaaca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctatttcaccagataatagttataaagtaataatccttaatgtccttcccttcttcaaca 620

                                                                       
Query: 421 ttaaatacctttgacacattaaaaacattaaagtaagccatcattttctttttaatactt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttaaatacctttgacacattaaaaacattaaagtaagccatcattttctttttaatactt 680

                                                                       
Query: 481 cttcaaggatagagtgttagaaaaataattgtgtcagtcccatgacagtcatgatacctc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cttcaaggatagagtgttagaaaaataattgtgtcagtcccatgacagtcatgatacctc 740

                                                                       
Query: 541 ttttataaatttccattttcaagattttgtttttattaaggaccctctccccatatggaa 600
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ttttataaatttctattttcaagattttgtttttattaaggaccctctccccatatggaa 800

                               
Query: 601 gtagtggaaatctgtttaca 620
           ||||||||||||||||||||
Sbjct: 801 gtagtggaaatctgtttaca 820


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 620
Length of database: 1020
Length adjustment: 10
Effective length of query: 610
Effective length of database: 1010
Effective search space:   616100
Effective search space used:   616100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)