Query= MSMg01no098_l16.b1 MSMg01no098_l16.b1 CHROMAT_FILE:
MSMg01no098_l16.b1 PHD_FILE: MSMg01no098_l16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:55:56 2005
(140 letters)
>mm_chr3_51520712_51521251
Length = 540
Score = 263 bits (136), Expect = 3e-75
Identities = 139/140 (99%)
Strand = Plus / Minus
Query: 1 gtgtttcatgggcttttccaagctatgtttggcatcctattggtacagtcaaatcactcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 gtgtttcatgggcttttccaagctatgtttggcatcctattggtacagtcaaatcactcg 281
Query: 61 ggtgatacgaataatcgatccatattgtttccttactgtctcttaactttttttaaatgt 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 280 ggtgatacgaataatcgatccatattgtttccttactgtctcttaactctttttaaatgt 221
Query: 121 taacctgacttccactccgg 140
||||||||||||||||||||
Sbjct: 220 taacctgacttccactccgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 140
Length of database: 540
Length adjustment: 8
Effective length of query: 132
Effective length of database: 532
Effective search space: 70224
Effective search space used: 70224
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no098_l16.g1 MSMg01no098_l16.g1 CHROMAT_FILE:
MSMg01no098_l16.g1 PHD_FILE: MSMg01no098_l16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:55:56 2005
(241 letters)
>mm_chr3_51362421_51363060
Length = 640
Score = 364 bits (188), Expect = e-105
Identities = 228/246 (92%), Gaps = 11/246 (4%)
Strand = Plus / Plus
Query: 1 attctcagtacccacatggaagctcacaactgtctgtaacatcagttccaccgaatatga 60
|||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 attcccagtacccacatggaagctcacaactgtctgtaacatcagttccagggaatatga 260
Query: 61 catcctcacgctgacatacatgcaaacagaaacaccactgcacatgacattaaagaagta 120
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||
Sbjct: 261 catcctcacgctgacatacatgcaaacagaaacaccactgcgcatgacattaaagaa-ta 319
Query: 121 aaaaaatcaccatcatcaacaaca---caaacaaacctaaaaaatactatttaggacaaa 177
|||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||
Sbjct: 320 aaaaaatcaccatcatcaacaacaacacaaacaaacctaaaaaatactgtttagggcaaa 379
Query: 178 aaaaaaaaacc--aggaagaatgagagcgacagtgacactttgttaagaacactttttct 235
|||| || |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 380 aaaa-----ccccaggaagaatgagagcgacagtggcactttgttaagaacactttttct 434
Query: 236 gtcata 241
||||||
Sbjct: 435 gtcata 440
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 640
Length adjustment: 9
Effective length of query: 232
Effective length of database: 631
Effective search space: 146392
Effective search space used: 146392
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
