CCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTTTGTTCCCCCACTTTTAAATAAGGTTATTCGGTTCTTTGGAGTCT
AACTTCTTGGTTCTTTGTATATATTGGATATTAGCCCTCTATCAGATGTG
GGATTAGTAAAGATCTTTTCCCTATCTGTTGGTTGCCTTTTTGTCTTATT
GACAGTGTCTTTTGCTTTACAAAAGCATTGTAATTTTATGAGGTCCCATT
TGTCGATTCTTGATCTTATAGCACAAGTCATTGGTATTCTATTCAGGAAT
TTTTTTCCCTGTGCCCATATCTTCGAGGCTCTTCCCTAGTTTCTCCTCTA
AAAGTTCCAGTGTATCTGGTTTTATGTGGAGGTCCTTGATCCACTTGGAC
TTGAGCTTCTTCAAGGTGATAAGAATGGATCGATTCGAATTCTTCTACAT
GTTGACTGCCAGTTGAACCAGCACCATTTGTTGAAAATGCTGTCTTTTTT
CCACTGGATGGTTTTAGCTCCTTTGTCAAAGATCAAGTGACCATAGGTGT
GTGGGTTCATTTCTGAGTCTTCAATTCTATTCCATTGATCTACCTGTCTA
TCATTGTACCAGTACCATGTAGTTTTTATCACGATTTCTCTGAAGTACAG
TTTGTGGTCAGGGATGGAGGTTTTCCCAAAAGTTCTTTTATTTTGAGAAT
AGTTTT

CAATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTCACATTTCCTTGTTTAATCTGCTCTGC
TGTAAAATATTCCTTAAGAATGCTAATAGATTCATGAACCTATTTTTGGT
TGAAAAAAATTACAAAATAAAATACAGCCAATACTAGCAGATTTATTCTA
TTCTTTGTGCCTCAAGGAAAACAGAGAAAGTACTGAATGAAAGTTACACA
GCATACTTTCCTTATTGGAAACCCATTTCTGATTTATGAGACAGTATTGG
GTTAACCGATCCTACCCTGAATACAGGGTATGTTGCGGGGGTGGACAGTA
CTGACCAATATCAACACCAAAGTCCTGGTTTTGAGCACTGTACTGAGGNT
TTTTTTTTTTTTTTTTTTTTTTTTTTTGAGAAATATGATTAAATAATTTA
GGCAACCTGTCTGAGCTAGCTATCCAGGCACAGGACACAGTATTAATTCA
GGCATACCTGAAAACTAACTTTCACTTACACTGTGGACTTTCAGACTCTT
TGCTAAAGCAATCTGGATTTGATTTGATTAATCAACCAACTTTATAAATC
AACTATTTATTATCAATTAATCATGGGTAACTGAAAGCATGCTCACATCT
GAGTTATTTGTAGGAATCATTACAAAACTAAAGGTTAAAAAAAAAGGTTA
TGCCAGCACACTTCC

Query= MSMg01no098_n03.g1 MSMg01no098_n03.g1 CHROMAT_FILE:
MSMg01no098_n03.g1 PHD_FILE: MSMg01no098_n03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:56:03 2005
         (452 letters)



>mm_chr3_132704821_132705672
          Length = 852

 Score =  835 bits (432), Expect = 0.0
 Identities = 444/452 (98%), Gaps = 7/452 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcacatttccttgtttaatctgctctgctgtaaaatattccttaagaatgctaatagatt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcacatttccttgtttaatctgctctgctgtaaaatattccttaagaatgctaatagatt 260

                                                                       
Query: 61  catgaacctatttttggttgaaaaaaattacaaaataaaatacagccaatactagcagat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catgaacctatttttggttgaaaaaaattacaaaataaaatacagccaatactagcagat 320

                                                                       
Query: 121 ttattctattctttgtgcctcaaggaaaacagagaaagtactgaatgaaagttacacagc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttattctattctttgtgcctcaaggaaaacagagaaagtactgaatgaaagttacacagc 380

                                                                       
Query: 181 atactttccttattggaaacccatttctgatttatgagacagtattgggttaaccgatcc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atactttccttattggaaacccatttctgatttatgagacagtattgggttaaccgatcc 440

                                                                       
Query: 241 taccctgaatacagggtatgttgcgggggtggacagtactgaccaatatcaacaccaaag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taccctgaatacagggtatgttgcgggggtggacagtactgaccaatatcaacaccaaag 500

                                                                       
Query: 301 tcctggttttgagcactgtactgaggnttttttttttttttttttttttttttttgagaa 360
           ||||||||||||||||||||||| |       ||||||||||||||||||||||||||||
Sbjct: 501 tcctggttttgagcactgtactgtg-------tttttttttttttttttttttttgagaa 553

                                                                       
Query: 361 atatgattaaataatttaggcaacctgtctgagctagctatccaggcacaggacacagta 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 atatgattaaataatttaggcaacctgtctgagctagctatccaggcacaggacacagta 613

                                           
Query: 421 ttaattcaggcatacctgaaaactaactttca 452
           ||||||||||||||||||||||||||||||||
Sbjct: 614 ttaattcaggcatacctgaaaactaactttca 645


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 43
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 852
Length adjustment: 10
Effective length of query: 442
Effective length of database: 842
Effective search space:   372164
Effective search space used:   372164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)