Query= MSMg01no098_o06.b1 MSMg01no098_o06.b1 CHROMAT_FILE:
MSMg01no098_o06.b1 PHD_FILE: MSMg01no098_o06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:56:08 2005
(564 letters)
>mm_chr3_115054674_115055637
Length = 964
Score = 1038 bits (537), Expect = 0.0
Identities = 558/565 (98%), Gaps = 2/565 (0%)
Strand = Plus / Plus
Query: 1 gattactgagaagacaacacaaacattgtttgccacactatttacaggaaatttattcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gattactgagaagacaacacaaacattgtttgccacactatttacaggaaatttattcta 260
Query: 61 ttcagcataagtaaaacatagaatgtacagtagttaacataacatttagaatatccataa 120
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 261 ttcagcataagtaaaacatagaatgtacagtagttaatataacatttagaatatccataa 320
Query: 121 ttgtagttaaaatacagtcaacatttctatccatgcaagcataaatgtgtacaatcataa 180
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 321 ttgtagttaaaatacagtcaacatttctatccatgcaagcctaaatgtgtacaatcataa 380
Query: 181 tgaattttacaaggcaaccttttgtcatatcactgatgtatcaagccaagtaccatggaa 240
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgaattttataaggcaaccttttgtcatatcactgatgtatcaagccaagtaccatggaa 440
Query: 241 tacattcagctctacagatgagccaatacaatgtggctgaccctgtagaacattgcacat 300
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tagattcagctctacagatgagccaatacaatgtggctgaccctgtagaacattgcacat 500
Query: 301 gtttctgagttaaatcctggcttctgctcaggaacagtttcagacttgcaccaggtgaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtttctgagttaaatcctggcttctgctcaggaacagtttcagacttgcaccaggtgaca 560
Query: 361 taggcctcacacttgggaaggtgttatgatcatttctatgctcagttgttgatgtcttaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taggcctcacacttgggaaggtgttatgatcatttctatgctcagttgttgatgtcttaa 620
Query: 421 aatcattcacaatggctgaatttatattggaccctaaaagtcccacagacctggataaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aatcattcacaatggctgaatttatattggaccctaaaagtcccacagacctggataaat 680
Query: 481 taatttcacaatctttattttcaaaatattattatgccaatcatagttttctaa-gggaa 539
|||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct: 681 taatttcacaatctttattttcaaaatattattatgccaatcatagtttt-taaagggaa 739
Query: 540 gacctattaatgagtaaattcaagg 564
|||||||||||||||||| ||||||
Sbjct: 740 gacctattaatgagtaaactcaagg 764
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 564
Length of database: 964
Length adjustment: 10
Effective length of query: 554
Effective length of database: 954
Effective search space: 528516
Effective search space used: 528516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no098_o06.g1 MSMg01no098_o06.g1 CHROMAT_FILE:
MSMg01no098_o06.g1 PHD_FILE: MSMg01no098_o06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:56:08 2005
(378 letters)
>mm_chr3_115189784_115190561
Length = 778
Score = 692 bits (358), Expect = 0.0
Identities = 373/378 (98%)
Strand = Plus / Minus
Query: 1 atgtgctttatgaaactgttttcctactgatatttgtattatttctaactccacaataat 60
|||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 578 atgtgctttatgaaactgttttcctactgatatttgtattatttctaatttcacaataat 519
Query: 61 tctatcattagttatatggacacacttgtattagtatttctgaagacactccagaatatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 tctatcattagttatatggacacacttgtattagtatttctgaagacactccagaatatg 459
Query: 121 acgttgaacaaataaacttaaaactgtggttaatattgctataatgcttttataaaaagc 180
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 acgttggacaaataaacttaaaactgtggttaatattgctataatgcttttataaaaagc 399
Query: 181 cttactggtttatgatcccatcataaccacatggataggccatactcctattctcttgtt 240
||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 398 cttactggtttatgatcccatcaaaaccacatggatagcccatactcctattctcttgtt 339
Query: 241 ggtactactcagtattattgttaataattgttctagtttgaattgaaagtatcttataaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 ggtactactcagtattattgttaataattgttctagtttgaattgaaagtatcttataaa 279
Query: 301 tatttttgttcttaattagctatgaatgtatacaacataaacactaacaaacataataat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 tatttttgttcttaattagctatgaatgtatacaacataaacactaacaaacataataat 219
Query: 361 caaggtttgtaatatata 378
||||||||||||||||||
Sbjct: 218 caaggtttgtaatatata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 378
Length of database: 778
Length adjustment: 9
Effective length of query: 369
Effective length of database: 769
Effective search space: 283761
Effective search space used: 283761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
