TCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCAGAAATCGGCGGAA
TCATTGTTTTTATTCGCTGAGAAGTATGCCATTGTGTAAATGTACCATAT
TTTCTGTATCTATTCCTCTGCTGAAGGTTCTTTCCAGCTTCTGGCTATTA
TATATTATGCTGCTGTGACCATAGTGGAAAATTTCCTGAACAGAATATCA
ATGGCTTATGCTCTAAGATAAAGAATTGACAAATGGGACCTCATAAAATT
GCAAAGCTTCTGTAAGGCAAAGGACACTGTCAATAGGACAAAATGGCAAC
CAATAGATTGTGAAAAGATCTTTCCCATTCCTACATCTGAGAGAGGGCTA
CTATCCAATATATACAAAGAACTCACGAAATTAGACCCTAGACACTCAAA
TAACCCTATTAAAAATGGAGTACAGAGCTAAACAAAGAATTTTCAACTGT
GGAAAGTTGGATGGACAAGAAGCACCTAAAGAAATGTTCAGGGGAAATAG
GGTGTTGCGGAGACAACCCCCCCCCAGAGACCTGGGAGGTGAGAGACTCC
CAGGACTCAAAGGGAGGGACCTTAGATGAAATGCCTAACAGTAGGGAGAG
AGAACTTATAGAGCCCACCTCCAGCAGGAAGACTGGATATCAAGTGAGGG
AATGGGTTGCTGTCCCACAGCACATCTCTGACCCATAGTTGTTCCCGTTT
GAAAGAAATATAGGGATGGAAATGGAGA

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTTTCTTTTGACTAATTTTTGAAACCACA
TGTTTACTTACTCTAAATTACATAGCCGCTAAATTTAAAATATTAGGACT
AAGAATTATGGGTTCAAAACATGTGCTAATATAACACTTGAAGTATTATT
TTTGTTACAAGAAAAGGATTGCTTAAGAAATATAAGGAATTAAGCAGACC
TGAGAAAGCCATGGCAAGGAGAAGGGCAGAGCACTCTACTGGTGTTCTGA
TTGGGTGTTTCTACTTAATTTAATATCTCGTAGTGATTGACATACTTAGG
AAACATAATTTAAATTTAAATATTGCAATCCCTTTAATTTCTCTGCTCTC
TCCTTATTTAAAATTAATCGTTCTGACCCCAAGCTCCCTCAGCACTGCCT
TCTCAGTTCTAATCACATGCAGCTCCTATTCCAGAGCATTTCCATTCCTT
GCCTTCCTTCTTTTATGAGACCTGGAGCCACCTGCCTCATTCATTTTCTT
TCTCTAAACCACAAATGAAGCTTCCCGCGCGTGTGAGCACAAATGGAGAA
GGCAAGAAACCCCCTCTTTAACAGTGATACCTGGAGAGCAGGCTACAGGT
CCCATTCCCCCCTTATTTTAAAGTCGGCGTTCCCAGTGGATGACCTTGAT
GACGTCATTTAGCCCTCTGACCTA

Query= MSMg01no101_b22.g1 MSMg01no101_b22.g1 CHROMAT_FILE:
MSMg01no101_b22.g1 PHD_FILE: MSMg01no101_b22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:59:12 2005
         (547 letters)



>mm_chr3_109810884_109811830
          Length = 947

 Score = 1004 bits (519), Expect = 0.0
 Identities = 540/547 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   tttcttttgactaatttttgaaaccacatgtttacttactctaaattacatagccgctaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 747 tttcttttgactaatttttgaaaccacatgtttacttactctaaattacatagtcgctaa 688

                                                                       
Query: 61  atttaaaatattaggactaagaattatgggttcaaaacatgtgctaatataacacttgaa 120
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 687 atttaaaatattaggactaagaattatgggttcaaaacatatgctaatataacacttgaa 628

                                                                       
Query: 121 gtattatttttgttacaagaaaaggattgcttaagaaatataaggaattaagcagacctg 180
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 627 gtattatttttgttacaagaaaaggattgcttaagaaatatagggaattaagcagacctg 568

                                                                       
Query: 181 agaaagccatggcaaggagaagggcagagcactctactggtgttctgattgggtgtttct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 agaaagccatggcaaggagaagggcagagcactctactggtgttctgattgggtgtttct 508

                                                                       
Query: 241 acttaatttaatatctcgtagtgattgacatacttaggaaacataatttaaatttaaata 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 acttaatttaatatctcgtagtgattgacatacttaggaaacataatttaaatttaaata 448

                                                                       
Query: 301 ttgcaatccctttaatttctctgctctctccttatttaaaattaatcgttctgaccccaa 360
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ttgaaatccctttaatttctctgctctctccttatttaaaattaatcgttctgaccccaa 388

                                                                       
Query: 361 gctccctcagcactgccttctcagttctaatcacatgcagctcctattccagagcatttc 420
           |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 387 gctccctcagcactgccttctcagttctaatcacatgcagttcctattcccgagcatttc 328

                                                                       
Query: 421 cattccttgccttccttcttttatgagacctggagccacctgcctcattcattttctttc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 cattccttgccttccttcttttatgagacctggagccacctgcctcattcattttctttc 268

                                                                       
Query: 481 tctaaaccacaaatgaagcttcccgcgcgtgtgagcacaaatggagaaggcaagaaaccc 540
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 267 tctaaaccacaaatgaagcttcccgcgcgtgtgagcagaaatggagaaggcaagaaaccc 208

                  
Query: 541 cctcttt 547
           |||||||
Sbjct: 207 cctcttt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 947
Length adjustment: 10
Effective length of query: 537
Effective length of database: 937
Effective search space:   503169
Effective search space used:   503169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)