Query= MSMg01no101_d10.b1 MSMg01no101_d10.b1 CHROMAT_FILE:
MSMg01no101_d10.b1 PHD_FILE: MSMg01no101_d10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:59:20 2005
(255 letters)
>mm_chr3_157173821_157174475
Length = 655
Score = 329 bits (170), Expect = 1e-94
Identities = 189/196 (96%), Gaps = 2/196 (1%)
Strand = Plus / Plus
Query: 1 ttttctaaacttagctctcaagtaagtatggcttagtaagttcccactgctctaggccag 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 201 ttttctaaacttagctctcaagtaagtatggcttagtaagttcccactgctctagggcag 260
Query: 61 gttcctcatgaatgaatttttatcccaccctccactacaagtaagaggaagtctaaggct 120
||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||
Sbjct: 261 gttcctcatgaatgaatttttatcccatcctccaccacaagtaagaggaagtctaaagct 320
Query: 121 ctatcacagtatagacaactaggaaatgctccttagtgcatatctatatctatatctata 180
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 321 ctatcacagtatagacaactaggaaatgctccttagtgcatatctataactatatctata 380
Query: 181 tctatatctatatcta 196
||||| |||||||||
Sbjct: 381 tctat--ctatatcta 394
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 255
Length of database: 655
Length adjustment: 9
Effective length of query: 246
Effective length of database: 646
Effective search space: 158916
Effective search space used: 158916
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no101_d10.g1 MSMg01no101_d10.g1 CHROMAT_FILE:
MSMg01no101_d10.g1 PHD_FILE: MSMg01no101_d10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:59:20 2005
(243 letters)
>mm_chr3_157307492_157308134
Length = 643
Score = 408 bits (211), Expect = e-118
Identities = 235/243 (96%)
Strand = Plus / Minus
Query: 1 ggatgaaactacagatcccagagaaggggcagtgtgacataccagtgtctgagcagatac 60
||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 443 ggatgaaactacagatcccagagaaggggaagtgtgacatagcagtgtctgagcagatac 384
Query: 61 tgaacctctgccaaacgaaaggctgaactggaaggcaggaggggagtcagaagggcaggt 120
|||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 383 tgaatttctgacaaacgaaaggctgaactggagggcaggaggggagtcagaagggcaggt 324
Query: 121 ggaagaaggaagaacaacttgttggatttacaagcatgtaagtgtgtacaagatggaagc 180
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ggaagaaggaagaacaacttgctggatttacaagcatgtaagtgtgtacaagatggaagc 264
Query: 181 tattaaataactcaaatatttttcaaagctcattatttcaacacagacaaaatcatttta 240
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 263 tattaaataactcaaatatttttcaaagcccattatttcaacacagacaaaatcatttta 204
Query: 241 ttt 243
|||
Sbjct: 203 ttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 643
Length adjustment: 9
Effective length of query: 234
Effective length of database: 634
Effective search space: 148356
Effective search space used: 148356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
